| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2586 |
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| Symbol | |
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| ID | 4920892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3050329 |
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| End bp | 3053469 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164180 |
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| Product | amidohydrolase |
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| Protein accession | YP_001094711 |
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| Protein GI | 127513514 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0150896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCC ATTTTCTCTC TGTGAGCGCG AGTCTGGCGG CCTGTCTCTT GGCGAGTCCG
TCCGCGATAG CGAATTCTCA ATTAACTGAT AACACGCCAA AATTAACGGC GCTATCCCAC
GCCACCCTGA TGATCGCCCC CGGCGAAACC AAGCAGGATG CCACACTGTT AATTGAAGAT
AATAAAATTA AAGCCATTAT CCCCAACGAC AAAATACCCG AGGATGCCTA TGTCATCGAC
ATGACGGGTA AGTTGATATA TCCCGGCTTT ATCGATCCCT ACACCAATTA CGGTATCGAC
TTTAAATATG ACCAGCAGAA AGTGGCTCGC CCGGTATATG AAATTAAGCG TATCGGTGGC
AACGCCGATA ATGGTGCCGT GCACGCAGAG AAAGAGTGGT TTAACTATAT TTATCCCGAC
CAGGAAGCGG CGAAGCAATG GATAGATAAT GGATTTACCA GCGTACAAAC CGGCATGTTG
GATGGGATAT TCAGAGGCCG GGCAGCGACT GTCTCGCTGG CGGCGTTAAA AGCCAATGAC
ATTATTTATC GCGCAAAATC CAGCCACCTG CTCGCCTTCG ATAAAGGCAG TTCGATTCAG
GATTATCCCA ACTCCTTGAT GGGTAGCATC GCCCTTATTC GGCAAACTCT GGCCGATGCC
AACTGGTATC AGGCCAATAT CGATAAAGCG GACTCGGCCA CCCAAGAGAA GAACATAGAG
TTTAATATCG CGCTCGAACG CCTGAGCGAT ATAAGCAAGA GCCCTACGGT ATTTGAAACC
AAGAATTTAA ATAACTTACT GCGGGCTGCT CACTTATTAA ACGAGTTTAA ATTGCCGGCG
ACTCTGGTCG GCAGTGGCCG AGAATATGCG CGAATCGATG AGGTGAAAGC CAGTGGCTTT
AGCATAATTG CGCCGCTCAA TTTTCCCGCG GCGCCCAATA TTAAAGATGG CGATAAAGAG
AGAGAGATAA GCCTGGCTCA TCTGCGCCAC TGGGAACGCG CGCCGAGTAA TCCTCATGCA
CTGGAAAGAG CCGGTATTCC CTTTGCCTTT ACCCAACATG GCATCAAGGC CGACGCCTTC
TGGCCTAGAC TCAGACAGGC GGTCAAGCAG GGACTGAGCC AAGAGACGGC ATTGGCGGCG
CTCACCACAG AGGCGGCAGA AATTGCCGGC ATCTCGGCAT TCAGCGGCAA GCTGAAACCC
GGCTTCATGG CGGATCTTGT GGTCACCAAC GGCGACATCT TTACCCAAGG CAAGATAGTC
AGCGTCTGGC TCCAAGGCAG CGAGACCCAA AAAGTGCCCC GCGACAGACA CTGGCTAAGC
CAGGGCTATC AGCTGACCCT GGGCGAACTC ACCCTAGATC TGGACTTAGT CGATGACGAC
AAGCTGAGCG GCACCCTGGC CAGCGGCGAG CAGGAGATCA AACTTAGCGA TCTTAAGTAT
GCCAAGGAGC GTCTCACCTT CAACGCCGAG CTCGGCGAGG CGGGTTACCC TGGCATCAGC
CGTTTCACCC TCTGGTTCGA CGCCCAGGGT ATTCACGGTC GTATGCTCGA CAAGAGCAAT
CGCCAACACC CCATAGCTGG TGTGGTGATG GCCAAAAACG CCATTGATGG CAGTGGTGAG
AGTGATAAGA GTGATGAACA GAAAGCGGCC GAGTCACCTG CGCCCGAACT CGTCTCTAAG
CTGACCAAGC CCAACACCGC CTACGGCCTA ACGGCGCAGC CCAAGGCTAA GCGCCTGCAT
ATCAAAAATG CCACCCTGTG GACCTCGAGC GAGCAAGGGG TGCTGGAAGG CTATGATCTG
CTTATCCGCG ATGGTCGTAT CGAGAAGATT GGCCAATCCC TCAAGACGCC ATCTGGCTAC
CAAACCCTGG ATGCCACGGG TAAACACCTG AGCGCAGGTA TTATCGACGA GCACTCCCAC
ATCGCCCTTA ACGGCGGCAC CAACGAAGAT ACCGACGCCG TCACCGCCGA GGTGCGTATC
GGCGATGTGA TCAACCCAGA CGATATCGCC ATCTACCGCG CTCTGGCGGG CGGGGTGACC
ACGGCGCAGA TCCTCCACGG CAGCGCCAAC CCCATAGGCG GACAGGCCCA GGTGATCCAG
ATGCGCTGGG GCGAGAGCGC CGAGGCGATG AAGCTCAAGC AGGCCCCCGC CAGCATCAAG
TTTGCCCTGG GTGAAAACGT CAAGCAGGCC AACTGGGGCG ACAACTACAA CCGTCGCTTC
CCCCAGAGCC GCATCGGGGT GAAGTCACTG TTTGAGGAGG CCTTCAACGA GGCGCTCGCC
TACGAGAAAG CCCTGGCAGA CTTCGATCGC CTACGCAGCA GTCAGCAACG CAAGCAGGTA
GCGCCTAAGC CAAACTATCG CCTCGAAGCG GTAGCCGAGG TGCTACGTGG CGATCGTCAG
GTACACATTC ACTCCTATGT GCAGTCTGAG ATCTTGATGT TCCTGCGCCT CGCCGAGGCC
TACAAGTTTA AGGTCGGTAC CTTCACCCAT ATCCTGGAGG GCTACAAGGT GGCCGAAGAG
ATGGCCAAGC ATGGCACCTA CGCCTCCACC TTCTCCGACT GGTGGGCCTA CAAGTTCGAG
GTCTATGATG CTATTCCGCA GAACACCTGC CTGATGCACA ACAAGGGGGT ACTCACCAGC
ATCAACTCGG ACGACTATGA GATGCAGAGA CGCCTCAATC AGGAGGCCGC GAAATCCATG
ATGTATTGCG ACATGTCGCC AACTGATGCC TGGAACATGG TCACCATCAA CCCGGCCAAA
CAGCTGGGGA TCGACCAGCT GACCGGCTCG CTGGAGGAAG GCAAACAGGC CGACCTGGTG
CTCTGGAGCG ACTCTCCCCT CTCCGTCTAT GCCAAGGTGG AGAACACCTG GGTGGGCGGT
CGTCGCTACT TCGACCGCCA GCAGGATAAG CAGGCGCAAC ATGAGGTCGA GCTGGAGCGC
GCCGCGCTGA TCCAGGCGGT ATTGACCCGG GATAAACCCG AGGTCCCCGG CGAGACGCCA
GAAGAGAAGA GCGAGCCCCA GTGGCACTGC GATACCCACT ACAATGCCTG GGGCACAGCC
CTTAGCGAGC ATAAAGCCAT GAACCAAAAC AGCGCCAAGC AATCTAGCGC CCACAACCAC
GCATTCATGG AGGCATTCTA A
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| Protein sequence | MRIHFLSVSA SLAACLLASP SAIANSQLTD NTPKLTALSH ATLMIAPGET KQDATLLIED
NKIKAIIPND KIPEDAYVID MTGKLIYPGF IDPYTNYGID FKYDQQKVAR PVYEIKRIGG
NADNGAVHAE KEWFNYIYPD QEAAKQWIDN GFTSVQTGML DGIFRGRAAT VSLAALKAND
IIYRAKSSHL LAFDKGSSIQ DYPNSLMGSI ALIRQTLADA NWYQANIDKA DSATQEKNIE
FNIALERLSD ISKSPTVFET KNLNNLLRAA HLLNEFKLPA TLVGSGREYA RIDEVKASGF
SIIAPLNFPA APNIKDGDKE REISLAHLRH WERAPSNPHA LERAGIPFAF TQHGIKADAF
WPRLRQAVKQ GLSQETALAA LTTEAAEIAG ISAFSGKLKP GFMADLVVTN GDIFTQGKIV
SVWLQGSETQ KVPRDRHWLS QGYQLTLGEL TLDLDLVDDD KLSGTLASGE QEIKLSDLKY
AKERLTFNAE LGEAGYPGIS RFTLWFDAQG IHGRMLDKSN RQHPIAGVVM AKNAIDGSGE
SDKSDEQKAA ESPAPELVSK LTKPNTAYGL TAQPKAKRLH IKNATLWTSS EQGVLEGYDL
LIRDGRIEKI GQSLKTPSGY QTLDATGKHL SAGIIDEHSH IALNGGTNED TDAVTAEVRI
GDVINPDDIA IYRALAGGVT TAQILHGSAN PIGGQAQVIQ MRWGESAEAM KLKQAPASIK
FALGENVKQA NWGDNYNRRF PQSRIGVKSL FEEAFNEALA YEKALADFDR LRSSQQRKQV
APKPNYRLEA VAEVLRGDRQ VHIHSYVQSE ILMFLRLAEA YKFKVGTFTH ILEGYKVAEE
MAKHGTYAST FSDWWAYKFE VYDAIPQNTC LMHNKGVLTS INSDDYEMQR RLNQEAAKSM
MYCDMSPTDA WNMVTINPAK QLGIDQLTGS LEEGKQADLV LWSDSPLSVY AKVENTWVGG
RRYFDRQQDK QAQHEVELER AALIQAVLTR DKPEVPGETP EEKSEPQWHC DTHYNAWGTA
LSEHKAMNQN SAKQSSAHNH AFMEAF
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