Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2582 |
Symbol | |
ID | 4920888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3045587 |
End bp | 3047152 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164176 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001094707 |
Protein GI | 127513510 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTT TGAGTTATGC CGATTCGGCA CTTTCTTTGC TGCCGCCCGT GGTAGCGATT CTGCTGGCGA TCTTTACCCG CCGCGTTCTG CTCTCACTCG GTGTGGGGAT CCTCCTGGGG GCACTGTTAA TTGCCGACTT TTCACCGCTG GATATGGGTC AATACCTGGG ACAGCAGGTG GTGGGCCTGT TTTGGGATGA TGGCGCCCTA AACAGCTGGA ACGTTTATCT GCTGGGCTTC TTGATTCTGC TTGGGATGAT CACCGCCCTG ATCACCGTCA GCGGCGCCGC CAAGGCCTTT GCCGATTGGG CGCGCCAGCA TATTCGCAAC AAGCGTGATG CTAAGCTGCT CACCATGTTC CTAGGCTGCG TGGTCTTTAT CGATGATTAC TTCAATAGCC TGGTGGTGGG CAGTGTCGCC AGACCCCTCA CCGACAGATA CTATATCTCG CGCAGCAAAC TGGCTTATTT GCTGGACTCA ACCGCCGCGC CTATCTGTGT GATCTCGCCC GTCTCTAGCT GGGGTGCCTA CATCATCGCG CTGATCGGCG GCATACTCAC CGCCCACGGC TTCACCGACA GCGGTCATCT GAGCGTGTTT ATTCAGATGA TCCCGATGAA CTTCTACGCC ATCTTCGCCC TGGTGCTGCT GCTATGCGTC GCCTTCATGG GGCTGGATGT GGGGCCCATG CGCCAGCATG AACTCAACGC GCAGAAGGGT AACCTGTATG ACGAGGCCAA GGGCCTGCCG CCAGGAGCTA ACAGCGACCT GCCCGAGGCC GATTCCGGCA AGATCTTAGG CCTGTTCCTG CCGATCACTG TGCTGGTGTT TGCCACCATC TACTTCATGA TAGGTAGCGG CGCCGATGCT CTGGCGGCGG AGAACCTGCC CTTTAGCGTC ATTGGTGCCT TCGAGAAGAC AGACGTTGCC TCATCGCTCT TCTTCGGCGC CGTGGTTGGC CTGGCCGCGA CCTTGGTATT GGTGGTCAGT CAGGGGCTGG ATAAGGCGCT TATCTTCAAA GGCGTGATTG CCGGTGCCCG CTCTATGCTG CCCGCCATCT ATATTCTGCT GTTCGCCTGG ACCATCGCCG GCGTGATAGG TCAGATGGAG ACGGGTAAAT ATATGGCCAG CCTGGCGACC GGTAATATTC CCTTCGCGCT GCTGCCGGCC GTACTGTTCG TGCTGGCGGG TCTGACTGCC TTCTCTACCG GCACCAGCTG GGGCACTTTC GGCATCATGC TGCCTATCGC CGCCGATATG GCCATGGGCA CCCATACCAA CATGATGTTG CCTATGCTGG CCTCTGTGCT GGCGGGCGCC GTGTTTGGCG ATCACTGCTC GCCTATCTCG GACACCACCA TCTTGTCTTC TACCGGCGCC AACTGTCACC ACATAGACCA TGTGCTGACT CAGCTGCCCT ATGCCCTTAT CGTGGCGGGG ATCAGCCTGG TGGGTTATAC CGTGCTGGGC TTCACCGAAT CCGTGGGTGC CGGTCTGGCG GCTTGTAGTG CGCTGTTTGT GGTGAGCGTT TTGGTGCTGC GCCATAAGGC CAATCGCCCG GCTTAA
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Protein sequence | MTTLSYADSA LSLLPPVVAI LLAIFTRRVL LSLGVGILLG ALLIADFSPL DMGQYLGQQV VGLFWDDGAL NSWNVYLLGF LILLGMITAL ITVSGAAKAF ADWARQHIRN KRDAKLLTMF LGCVVFIDDY FNSLVVGSVA RPLTDRYYIS RSKLAYLLDS TAAPICVISP VSSWGAYIIA LIGGILTAHG FTDSGHLSVF IQMIPMNFYA IFALVLLLCV AFMGLDVGPM RQHELNAQKG NLYDEAKGLP PGANSDLPEA DSGKILGLFL PITVLVFATI YFMIGSGADA LAAENLPFSV IGAFEKTDVA SSLFFGAVVG LAATLVLVVS QGLDKALIFK GVIAGARSML PAIYILLFAW TIAGVIGQME TGKYMASLAT GNIPFALLPA VLFVLAGLTA FSTGTSWGTF GIMLPIAADM AMGTHTNMML PMLASVLAGA VFGDHCSPIS DTTILSSTGA NCHHIDHVLT QLPYALIVAG ISLVGYTVLG FTESVGAGLA ACSALFVVSV LVLRHKANRP A
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