| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2580 |
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| Symbol | |
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| ID | 4921068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3041118 |
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| End bp | 3043151 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164174 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094705 |
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| Protein GI | 127513508 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAT TATTCACATC GAAAAGACTC GCCTACCTGG TCGCCGCCGT GCTGACCGGT
GCGCTAGTAG GATGCAGTGG AGATGACGGT AAAGATGGTA AAGATGGGGT TGATGGTCAA
CCCGGCGCAC CAGGCGAATC TTGGAAACCG CCGGTAGCAA CCAGCTCTCT GGAGAGCTTC
GTTAAGGTGA TCGACTACAC CTTGGGCGAA GGCACCATCA GCTTCGAATT CGAACTTACC
AATGAAAACG AAGAGCTGGT CAATGGCCTG ATGAACGCCG AAGGTAAAGT CGCCGCACTG
ACCGACAAAG GCTTTATCAA CAACCGTAAC GAAAGCCCAA TCAACGAAGT GGAAGACAAT
GTCCACATCG GCGGCGCGGT AACCATGAGC ACAGAGGGCG CGACACTGAC CGCTCTGGGT
GACGGCCACT ACCGCTTCGA TGCCCCTATG CCTGGGGTCA ACGCCGGTAC CGAAGGGATC
GTCTGGCTAC GTGTCGGCGG TAACAGCGAA TCGGGTATCG CTCGCTCCAA TGAGATAGTG
GTCAACAAGC CAGAAGGCGC CTTCTCGACC ACCACGGAAG CCTGTTTCTC CTGTCACGTC
GACTACTCGA CCAGCCCGAA TCGTCACTCA AGCTATGTGT CTCAAGGCAT GGACGGTGAA
GTCACCTTCG TCGAAGGCTG TATGGTCTGT CACGGCTCGG TGAGCCGCAA TGTGGTGAAT
GAACAAGGCT TCTCAGTTGG CGGCTACGCC AGAAACACCC TCTCTAAGAT AGGTCACATC
AATCACCAGG AATTTGAGAC CGGCTTTAGC GCCTTGAACT GTAGTTCTTG TCACAGCGAG
CCAACCGTCA ACGTCAACGT TGCCGGCCCA GGCTGTATCG ACTGTCATGA CACTGGCGGC
ATCCCAGGCG ATATCGTTCT CGGCAATGGC TCAGATCTGC GTAAGCTACA CGAAGCCAAG
AGCGCCATCA CCTCTAACCA AGCGATCAAG GATAGCTACA AGGTGACGGG TACGGCGCCA
GCCTGGTTCC CAGATTCAGG TGCTGCGGGT CAATGGTGTA CCACACTGTC TCTGTTTATG
GTCGATGCCG AAGGCAAGGA AACCTTAGTC GACCTACATG AACTGTTTGA TGATACCCAA
ACAATTCATA ACCCTGACAA GCCAATTAAC TATGTGGGCT CATACCTGCA CGGTGTGTAT
AACGACAGCG TGATTGGCCG TGTTACAGGT GCCTATGATT ACAGCTATGA CGCAGAGGGT
CGCAAGACCA TGTGTTTTGC GCAAGATGCT GGCCACGGAA ATCCACATGT CGTCGGCTCA
ACGCCGGATC TGACGGCTTG GGCTGATGCA GGCTTGATGG CCTCACTACG TGTCAGCTTC
ACCGCCAAAG ACTACATGGG CGCCGAATCT GACGTGGTGA CTATCCACGG CTACACAGAT
GTGGCATCAC AAGCCGATGG CGCTGTGACA GCCTACGAGC GTCGTCACAA CGTCGGCAGC
GAGTCTTGCA CTACCTGTCA CAACAGCGAA GCCAACTTCC ACAAGAATGG TAACTTCGCC
GAAGGTGGTC TGGGCTGTGT GGCCTGTCAC AACAATGGTC AAGATCGCCG CGCCGGCAAC
TCTTCACCAG GTTTCGGCCC TATGGTGCAC AGCATGCACT GGGGTGTGGG CAGCAAGAGC
CTGGATGAGA ACGGCAAGGA AGTGTCTAAC TCTGCCAGCG TGATCGCGCC GCAGACCGGC
TGTGTGGCCT GTCACGACAG CGGTGTGGTT GATCTGAAAG CCGTACCAAA TCAGTTCATC
AAAGCACGTG CCTATGGTGT AAGCAACAAG ATGGCCAGCC CAATCACGGC CAACTGTTAC
GCCTGCCATA ACGACGACAG CGCGCTGAAC CACATGATGC AAAACGGCGG TACCACCACG
GAAGATGTAC CTGCTACCGA GTGGTACAAG CTCAGCACCA CCGAGTCTTG TGCAACCTGT
CACGCCGAAG GCAGCAGTTT TGGTATCGAA AACTACCATA ACTTTACCCG CTAA
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| Protein sequence | MMKLFTSKRL AYLVAAVLTG ALVGCSGDDG KDGKDGVDGQ PGAPGESWKP PVATSSLESF
VKVIDYTLGE GTISFEFELT NENEELVNGL MNAEGKVAAL TDKGFINNRN ESPINEVEDN
VHIGGAVTMS TEGATLTALG DGHYRFDAPM PGVNAGTEGI VWLRVGGNSE SGIARSNEIV
VNKPEGAFST TTEACFSCHV DYSTSPNRHS SYVSQGMDGE VTFVEGCMVC HGSVSRNVVN
EQGFSVGGYA RNTLSKIGHI NHQEFETGFS ALNCSSCHSE PTVNVNVAGP GCIDCHDTGG
IPGDIVLGNG SDLRKLHEAK SAITSNQAIK DSYKVTGTAP AWFPDSGAAG QWCTTLSLFM
VDAEGKETLV DLHELFDDTQ TIHNPDKPIN YVGSYLHGVY NDSVIGRVTG AYDYSYDAEG
RKTMCFAQDA GHGNPHVVGS TPDLTAWADA GLMASLRVSF TAKDYMGAES DVVTIHGYTD
VASQADGAVT AYERRHNVGS ESCTTCHNSE ANFHKNGNFA EGGLGCVACH NNGQDRRAGN
SSPGFGPMVH SMHWGVGSKS LDENGKEVSN SASVIAPQTG CVACHDSGVV DLKAVPNQFI
KARAYGVSNK MASPITANCY ACHNDDSALN HMMQNGGTTT EDVPATEWYK LSTTESCATC
HAEGSSFGIE NYHNFTR
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