| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2574 |
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| Symbol | |
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| ID | 4921062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3034273 |
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| End bp | 3035178 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164168 |
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| Product | pyruvate carboxyltransferase |
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| Protein accession | YP_001094699 |
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| Protein GI | 127513502 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGCGA CGAATAGCTA TCCAAGCAAG GTCAGTATCT TCGAGGTCGG CGCCCGCGAC
GGCCTGCAGA ACGAGAAGGC GGTCACCACC GCCGACAAGC TGACCCTTAT CGATCAACTG
GGCGCGGCGG GCCTGACCCG TATCGAGGCC GGCAGTTTCG TCTCCCCCAA GTGGGTGCCG
CAGATGGCCG ACTCGGGCGA TATCTTCCGC CAGCTCAGCA AACGCCCGGG CGTGGTCTAC
AGCGCACTTA CCCCTAACCT CAAGGGGCTG GAACTTGCGC TTGACGCCGG GGCCGACGAG
GTGGCCATCT TCGGCGCCGC CTCGCAGAGC TTTAGCCAGC GTAACATCAA CTGCTCTATC
GAGGAGTCGA TCGAGCGCTT CATCCCTGTG ATGGAGGCGG CTCAGGCGAA ACAGATCCCC
GTGCGCGGCT ATGTGTCTTG CGTGCTGGGC TGTCCCTACG AGGGCGAGAT CCAGGTCGAG
GAAGTGGCTC GCGTGGCAGA GATCCTTTAC AAAATGGGCT GCTACGAGAT CTCTCTGGGT
GACACCATAG GCGTTGGCAC CCCCTTAAAT GCCCGTAGAA TGGTGGAAGC GGTCGCGCGC
AGGGTGCCGG TAGAGAAACT GGCGCTACAC TTTCATGACA CCTATGGTCA GGCATTAGCC
AACATTCTTG CCTGCCTAGA AACTGGCGTC AGCGTCATCG ACAGCTCGGT AGCAGGGCTC
GGTGGCTGCC CTTATGCCAA AGGCGCATCG GGCAACCTGG CCACGGAAGA TCTGGTCTAC
ATGCTTCACG GCATGGGAAT AGAAACCGGC ATTGATCTTA ACGCCCTGAT CACCGCGGGT
AACAACATCA GCCAGGCACT GGGCAGAGTC AGTGGTGCCA AGGTCGCACG CGCGCTAACA
GAATAA
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| Protein sequence | MSATNSYPSK VSIFEVGARD GLQNEKAVTT ADKLTLIDQL GAAGLTRIEA GSFVSPKWVP
QMADSGDIFR QLSKRPGVVY SALTPNLKGL ELALDAGADE VAIFGAASQS FSQRNINCSI
EESIERFIPV MEAAQAKQIP VRGYVSCVLG CPYEGEIQVE EVARVAEILY KMGCYEISLG
DTIGVGTPLN ARRMVEAVAR RVPVEKLALH FHDTYGQALA NILACLETGV SVIDSSVAGL
GGCPYAKGAS GNLATEDLVY MLHGMGIETG IDLNALITAG NNISQALGRV SGAKVARALT
E
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