Gene Shew_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2567 
Symbol 
ID4921055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3024276 
End bp3025259 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content54% 
IMG OID640164161 
ProductMORN repeat-containing protein 
Protein accessionYP_001094692 
Protein GI127513495 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA AAGGATTACT GGTGGGTTTA ATGCTGATTG CGCTGAGCGC AGTGGGGCTT 
AGCGTGAACA TGGGCGCATT CACCAAAGAC TATGCCGACT TCGAGAGCCT TGAAAAGATC
GATGGCCGCT TGCATCTGCG CGGCGAGGTC GAGCCCTATA GCGGTAAGGT GAAATTTTTC
GGCGATGACG GCTGGCTGAA GCAGCAAGCC ATGCTCAGTC AAGGCAAGCT TAACGGCGAG
CTGCAGGACT TTTATGAGAG TGGTGCCGTT CAGGCGATCA CGCATTATGT CGATGGTCAG
ATAACGGGTG TTACCCGTGT CTATCTGGAA GATGGCACCC TGAATAAGGA GATCCCCTAT
CAAGATGGGC TGAAACAGGG CACAGAAAAA CACTATGGCT TCGAGGGAGG CCTGCTGTCT
GAGTCCATCG AATATCGCCA GGGCAAGCGT AACGGCTGGA GCACGAGTTA CTGGGATCCA
GGCAGATTAA GGAATCGCAT CCATTATGTG GACGACCTGC GTGACGGCCT GTGGCAGCAA
TACAGCTTCG GCAAGGTGGT GATAGAAGGC ACCATGGTCG AAGACAAAGA GGAGGGCGAG
TGGCGCACCT ATTTTCAGGA TACCGACATC TTGCAGGGGA TCGCTCATTT CAAGGCGGGC
CAGCTTCACG GTGAGGTGAC CGAGTTTTAT CAAAATGGTG CCAAGGAGTG CATCGAATAT
TATGCGGCAG GCAGTAAGGT TGGCACCTGG ACACGTTTTT ATGATGATAG CAGCCTGGAG
CAGGTGAAAA ACTATCGTAA TGACAAGCTA GAGGGCAGCT ATCGCGAATA TTTCCGCGGT
GGTCTGCTTG CCGAAGAGGG GCAATACCGA GATGGCGAGA AGGTCGGTAT ATGGCGCCGC
TTCAGCCCGG ATGGTCAGCT ACTCTCCGAG CATGAGGAGC AAAGGGTCAG GCTGGAAGCG
GACATAGCTG TGAGCGAGGA GTAA
 
Protein sequence
MKAKGLLVGL MLIALSAVGL SVNMGAFTKD YADFESLEKI DGRLHLRGEV EPYSGKVKFF 
GDDGWLKQQA MLSQGKLNGE LQDFYESGAV QAITHYVDGQ ITGVTRVYLE DGTLNKEIPY
QDGLKQGTEK HYGFEGGLLS ESIEYRQGKR NGWSTSYWDP GRLRNRIHYV DDLRDGLWQQ
YSFGKVVIEG TMVEDKEEGE WRTYFQDTDI LQGIAHFKAG QLHGEVTEFY QNGAKECIEY
YAAGSKVGTW TRFYDDSSLE QVKNYRNDKL EGSYREYFRG GLLAEEGQYR DGEKVGIWRR
FSPDGQLLSE HEEQRVRLEA DIAVSEE