Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2564 |
Symbol | |
ID | 4921104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3022340 |
End bp | 3023152 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164158 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_001094689 |
Protein GI | 127513492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.295331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACC TTCCCTTAGC CCTAGTTGCC CTTGGCAGCA TCAATCTGGC CCAGGCCGCC GAGTCGGACA CCTATATCAG CAATGGTCAG GTCTATCACA GCAGAGGCTG GGTGGTAGAG TTTGGCGTTG GCTATAACTC AGACATCATC AAAGAACAGA AGAACGACTA CAATTTTGCC TTCGGCGACC ACAACCGCTT CGGCCCCCGC GTGAATGTGG GCTACCACGG CGATCGCTTC AACGCGGATC TGGACAAGGG CATCAACTAC CGCCTCTTTG GCAAAGACAG AGATGCCATC ACCTTCAGCA CCTACCTGAC AGGTAACGGC CTCTGGCTGG ACAAAGATGT GTCTAAGGTG CTGGCCGGCA TGGAAGATCG TCGTATCAGC GTGGATCTGG GCCTGAACAT GGATATTAAG GTGGGGCCGC GCGGCGTCCT CTCCACCAAC TTCCAGCACG ATATCAGTGG CGAATATAAG GGCTATGTGG CGGGTGTGCG CTATCAGCAG ATCCTCAAGC TTGGCCGTCT GGATCTGGTG CCGTTTGTGG GCGTAAGTTA CAACAGCGCC AAGTTTAACG ATCACTACTT TGGCGTCAGC AAGAAAATGG CTATGCCTAA GCGTGCGCAG TATGAGGCCA AGGCCGGCGT TAACTATGAC GTTGGCTATC AGCTGATACT GCCGCTCTCG AGCAATTGGC GCATTACCCA GCAGACCAGC TACACCCGCC TGAGCAAGGA GATTGCCGAC TCGCCCATTA CCGATTCACG CAATCAGTGG TCGGCCAACC TGATGGCGAG CTACCGTTTC TAA
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Protein sequence | MNYLPLALVA LGSINLAQAA ESDTYISNGQ VYHSRGWVVE FGVGYNSDII KEQKNDYNFA FGDHNRFGPR VNVGYHGDRF NADLDKGINY RLFGKDRDAI TFSTYLTGNG LWLDKDVSKV LAGMEDRRIS VDLGLNMDIK VGPRGVLSTN FQHDISGEYK GYVAGVRYQQ ILKLGRLDLV PFVGVSYNSA KFNDHYFGVS KKMAMPKRAQ YEAKAGVNYD VGYQLILPLS SNWRITQQTS YTRLSKEIAD SPITDSRNQW SANLMASYRF
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