| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2558 |
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| Symbol | |
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| ID | 4921098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3015276 |
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| End bp | 3016148 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164152 |
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| Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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| Protein accession | YP_001094683 |
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| Protein GI | 127513486 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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| TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT GGATCCTGGC GACACGCCCA CGTACTCTTC CCGCAGCCAT TGGCCCTATC
TTAGTCGGTA ATGCCCTTGC CCTGTCATTG ACACAATTTA GTTGGCTTAT CGCCGCAACT
TCAATGTTGT GCGCCCTGCT GCTGCAGATC GCCGTTAACC TGGCGAACGA CTACTTCGAT
TTTAAGAGCG GTATCGACAC CGAGGAGCGA CTCGGCCCGG TGCGCGTCAC CCAGAGTGGC
CTGCTCGACC CCAGCAAGGT ACGCAACGCC ATGATCGCCT GCCTGCTGCT GGCGCTACTG
GTGGGCTCGC TGCTCATCTA TCATGGTGGC TGGCCCATCG CCATCCTGGC CGCCGCCTCT
ATCCTCGGCG CCCTGGGTTA CAGTGGCGGC CCCTACCCGC TGGCCTCCCA TGGTCTGGGT
GAAGTCGCTG CCTTTATCTT CTTCGGCCTG GTGGCCGTGG TCGGCAGCTA CTACCTTCAG
GCCCATGACA CCAGTGTCGC CGCCTGGATC TTAGGCAGCG CCATCGGCCT GTTTAACGCC
GCCGTGATGC TGGTAAACAA CACCCGCGAC ATCCCCACGG ATGCCAAGGC AGGCAAGCGC
ACCCTGGCGG TTAAGATAGG TGAAGGTCAG GCCAGAGTCC TGTATCAGGC GCTTGTCTAT
CTGCCTTTCG CCCTCGTCAT CGGCGGTTTT CTGCTTGGGA CTTTACCCGG CCTGCCTGTG
CTGCTCGGTG GCCTGTCGCT AGTCCTGGCG CGCAAACTCA ACAGCGAATT TAGTCAGACC
TCGGGGGCGG CGTTAAACCC GCTGCTGGGA CGCACGGCGA AACTCACGGT GATCTTCAGC
GCCCTGTTCA GCCTAGGACT CGCCTTAGCC TAA
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| Protein sequence | MNPWILATRP RTLPAAIGPI LVGNALALSL TQFSWLIAAT SMLCALLLQI AVNLANDYFD
FKSGIDTEER LGPVRVTQSG LLDPSKVRNA MIACLLLALL VGSLLIYHGG WPIAILAAAS
ILGALGYSGG PYPLASHGLG EVAAFIFFGL VAVVGSYYLQ AHDTSVAAWI LGSAIGLFNA
AVMLVNNTRD IPTDAKAGKR TLAVKIGEGQ ARVLYQALVY LPFALVIGGF LLGTLPGLPV
LLGGLSLVLA RKLNSEFSQT SGAALNPLLG RTAKLTVIFS ALFSLGLALA
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