| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2551 |
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| Symbol | |
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| ID | 4921166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3008237 |
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| End bp | 3009202 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164145 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_001094676 |
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| Protein GI | 127513479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAA AAATTCCCGA TAATCTGCCA GCGGCGGAAA TTCTCGAATC AGAAAATATC
TTTGTCATGT CCGAGACCCG GGCGGCCAAT CAGGATATCA GACCCATGAA GGTGCTGATC
CTCAACCTGA TGCCAAACAA GATAGAGACT GAGACTCAGC TGCTTCGCCT CCTGGGTAAT
ACCCCCTTGC AGGTGGATGT GGATCTGCTG CGCATCCATG ACAAGGTCTC CAAGCACACC
TCTATCGACC ATATGAACAA CTTCTATCGT GATTTCGAGG CGGTGCGCCA TAAGAATTAC
GATGGCCTGA TCATCACGGG CGCGCCTTTG GGGCAGATAG AGTTTGAAGA GGTAACCTAC
TGGGATCATA TTCGCGAGAT CATCGACTGG TCCCAGCACC ATGTGACCTC GGTGCTGTTT
CTCTGCTGGG CGGCCCACGC GGCCCTGTAT CACCTCTATG GCCTGCAGCG TAAGCTGCTC
TCGGCCAAGC GCTCCGGAGT GTTTAATCAC CAGCGCACCC ATAAACATTT TCCGCTGCTG
CGGGGCTTTG ACGATGAGTT CTTCGCGCCC CATTCTCGCT TTGCCGAGAT GGAAGTGGCC
GATCTCAAGG CTCACAAGGA GCTGCAGGTG CTGGCCGAGT CCGACGAGGC GGGCGCCTAC
CTGGTGCTGA GCCGCAACAA TCGCAACCTG TTTGTGATGG GCCACCCCGA ATATCAGAAA
TCCACCCTGA AAGACGAGTA TCAGCGAGAT CTCGCCGAAG GCCTTAACCC GAGAGTGCCG
AAAAACTATT TTCGCGGCGA TGACCCCAGT CAGGCGCCAG TCGCCCGCTG GCATGGTCAC
GGCAGTCTCT TGGTCAGCAA CTGGCTTAAC TACTATGTCT ACCAGCTGAC CCCCTATGAT
CTCCATGATA TGAGCGCTAT CACCCCCTGG GAGCATGAGT ACAAGGATGC CGAGGACAAT
GACTAA
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| Protein sequence | MPVKIPDNLP AAEILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN
TPLQVDVDLL RIHDKVSKHT SIDHMNNFYR DFEAVRHKNY DGLIITGAPL GQIEFEEVTY
WDHIREIIDW SQHHVTSVLF LCWAAHAALY HLYGLQRKLL SAKRSGVFNH QRTHKHFPLL
RGFDDEFFAP HSRFAEMEVA DLKAHKELQV LAESDEAGAY LVLSRNNRNL FVMGHPEYQK
STLKDEYQRD LAEGLNPRVP KNYFRGDDPS QAPVARWHGH GSLLVSNWLN YYVYQLTPYD
LHDMSAITPW EHEYKDAEDN D
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