| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2548 |
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| Symbol | |
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| ID | 4921163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3004857 |
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| End bp | 3006845 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164142 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_001094673 |
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| Protein GI | 127513476 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACT ATTTCCTGCA AGCCTTTATC TATCTGGTCG CCGCCGTGAT CGCCGTGCCC
CTGGCCAGGC GTTTTGGCCT GGGTTCGGTA CTTGGCTACC TGATCGCCGG GGTGGTGATA
GGGCCTGTGA TCGGCCTAGT GGGGGAGGAG ACCTCAGTCA TTCAGCACTT TGCCGAGTTC
GGTGTGGTGA TGATGCTGTT TGTGGTGGGA CTCGAGCTCG AACCTAAGAT GCTGTGGGCC
ATGCGGAACC GCCTGATGGG CCTGGGTGGG TTGCAGCTTA CGCTGACCAC GGCCGCCGTG
GCGGCCATTG CGCTCTATTT CGAGGTGCAG TGGAGCATCG CCTTTACCAT AGGCCTTATC
TTCGCGCTCT CATCGACGGC GATCGTGTTG CAAACCTTTA ACGAGAAGGG ACTCAATCGC
ACCGATGGTG GCCGAAACGC CTTCTCTGTG TTGCTGTTTC AAGATATCGC TGTGATCCCC
ATGCTGGCCT TTATCCCACT GTTGGCCCTG CCGGAGCTGG TGGAGCAGGC GCAGCAGGCG
GCGACTCAGG TGGCGACCAA GCACGAAGAG ATAAGTCTGG TGGCCGGCTT GCCGCCCTGG
GCCTACGCCA TAGTGATCGT CGCGGCTATC GCCATCTTAG TGGTGGGCGG CCACTACCTG
AGCCGTCCCC TGTTTCGTTT CGTGGCCTCA TCCGGGGTGA GGGAGATCTT TACCGCCACC
GCCCTGATGT TGGTGATTGG CATCGCGGCC CTGATGAGCC TGGTGGGGCT TTCGCCGGCT
CTGGGCACCT TTTTGGCGGG CGTGGTGTTG GCCAACAGTG AGTTTCGCCA TGAACTTGAG
TCCAATATCG ACCCCTTCAA GGGCTTGCTG TTGGGGCTTT TCTTTATCAC AGTCGGTGCC
GGTATCGATT TTGGCATCCT GTGGCAGGAT CTCGGCCTCA TCCTGGGGCT GACCCTGGGG
ATCATAGTGC TTAAGGCCTT GGTGCTCTTG CTGATCTCGC CTGTGTTCAA GATAGGCAAA
AGCGATCGCT GGCTGTTCGC CCTCAGTCTG GCCCAGGCAG GGGAGTTTGG TTTCGTGCTG
CTCAGTTTCA CCGTGCAGAA TCATGTGCTG CCGAGCGAGC TGGCGCAGAA GCTCTCATTG
GTGGTGGCCC TGAGCATGAT GTTGACCCCA GGACTGTTTA TTCTGTTTGA GCGTTTTATT
GAGCCCAGGT ATCGCAGCGC CAAGGCGGAT CGCGAGGCGG ACACCATAGA TGAGCACGGC
AGCGTGATCA TCGCGGGCGT CGGTCGTTTC GGACAGGTGA TCAATCGCCT GCTGAGCGCC
AATGGCATCA AGACTGTGGT GCTGGATCAT CAGATTAGCC AGGTGGATAT GCTGCGGCGC
ATCAATGTGA AGAGTTATTT TGGTGATGCG ACCCGCCCGG ACCTGCTGCA TACGGCTGGG
ATAGAGGAAG CCTCCCTGTT GGTGGTGGCC ATGGACAATC GAGACAGCGC GGTGGAGCTG
GTGAAGTATG TCAAGCACAG CTATCCCAAG GTCAAGGTGC TTGCCCGGGC GTTCGACCGC
GGTCATGCCT ATCTGCTGCG GGATGCAGGT GCCGATTTCA TCCAGAAGGA GACCCTGCTC
TCAGCCCTTG AGCTGGGGGC CGACGCCATG AAGTGTCTCG GCTTTCACCC CTTCCATGTG
GAGCAGCAGA AGAACACCTT CAAGCGCATC GAGAAGCGCA GCTCCGACAT GCTCTACGGC
GCCTGGAAAG ATGACAGCAG CGGCGAGCGA TTCGATAACA ACTATCGCAA GCTGTTTATC
GAGCTTGAAG AGACCATCAA GGCCGCCATG GCCAGGGATA GAAACGATAA GTATGCCATG
AGCGAGCGGG GCTGGACGCC GCCGCCCAAG GGCTATGACG AGCTACTGGA CGGCGATGAG
CCCCTGACCG TCAAGCGGGT CGATGAGCCT TTGCCATCGA CGCCTGGTGA CGAGCAGATC
AAGCCTTAA
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| Protein sequence | MTNYFLQAFI YLVAAVIAVP LARRFGLGSV LGYLIAGVVI GPVIGLVGEE TSVIQHFAEF
GVVMMLFVVG LELEPKMLWA MRNRLMGLGG LQLTLTTAAV AAIALYFEVQ WSIAFTIGLI
FALSSTAIVL QTFNEKGLNR TDGGRNAFSV LLFQDIAVIP MLAFIPLLAL PELVEQAQQA
ATQVATKHEE ISLVAGLPPW AYAIVIVAAI AILVVGGHYL SRPLFRFVAS SGVREIFTAT
ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIDPFKGLL LGLFFITVGA
GIDFGILWQD LGLILGLTLG IIVLKALVLL LISPVFKIGK SDRWLFALSL AQAGEFGFVL
LSFTVQNHVL PSELAQKLSL VVALSMMLTP GLFILFERFI EPRYRSAKAD READTIDEHG
SVIIAGVGRF GQVINRLLSA NGIKTVVLDH QISQVDMLRR INVKSYFGDA TRPDLLHTAG
IEEASLLVVA MDNRDSAVEL VKYVKHSYPK VKVLARAFDR GHAYLLRDAG ADFIQKETLL
SALELGADAM KCLGFHPFHV EQQKNTFKRI EKRSSDMLYG AWKDDSSGER FDNNYRKLFI
ELEETIKAAM ARDRNDKYAM SERGWTPPPK GYDELLDGDE PLTVKRVDEP LPSTPGDEQI
KP
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