Gene Shew_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2543 
Symbol 
ID4921158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2999246 
End bp2999665 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID640164137 
Productglyoxalase family protein 
Protein accessionYP_001094668 
Protein GI127513471 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC CGCAAGTGTT ACACCAGGCA CCTTTACAAC AGGCACCTTT AGTCTGGGGC 
GAGATCGCCG TCGAGGATAT GGCGCGGGCC AAGGCCTTCT ACCAGACTCA GTTCGGGGTG
CGTTTTCGCG ATGAGCAGAT GTTTGGCATG GAGATGGCCA TACTAGAGAC TGAGGCGCCC
CAGGCGGCCA GCATCGCCCT GGTAAAACAT GATATGATGC GCCCAAGTGG AGCCGGCAGC
ATCCTCTATC TGCACCTTAG CGATCACCTG GCGCCGTTGG CGGAGAGGCT GGAGCGCAGT
GGTGTCGAAA TCGCTTTGCC TGTCATGGCT ATCAAGGAAG GGGAGTGCGG CTATAGCTGC
GTCATCGTCG ATAGCGAAGG CAATCGCGTC GGCCTCTGGG CACCGAGTCT GAAAGGCTAG
 
Protein sequence
MQEPQVLHQA PLQQAPLVWG EIAVEDMARA KAFYQTQFGV RFRDEQMFGM EMAILETEAP 
QAASIALVKH DMMRPSGAGS ILYLHLSDHL APLAERLERS GVEIALPVMA IKEGECGYSC
VIVDSEGNRV GLWAPSLKG