| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2537 |
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| Symbol | |
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| ID | 4921242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2995324 |
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| End bp | 2996262 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164131 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001094662 |
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| Protein GI | 127513465 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAC CAGCAACTGA GTCAACAACC AAGCATGCCG CTGATCCCCA ACGTCTCGGC
CGTAAATCGG CAAAGGCCCA AGCAATAGCC CGAGAAAAGC AGCAGACAAA AGAGCAGGCC
AACTTCAGCC TGGCAAAGGA GCTGGGCGGC ATAGAGCTAC TGGATGCCAG TTACCATCAG
CAAAACTTCT CGCGCCACAG CCACGAGGGC TATACGGTGG GCGTTATCGA AACCGGCGCC
CAACGTTTCT ATCGCACCGG CGGCGATCAC ACGGCGCCTC AGCATAGCAT CATATTGGTA
AACGCAGATG AGGTGCATAA CGGCCGCTCG GCCACAGACT TTGGCTGGTC CTATCGCGCC
ATGTATCCGC TGCCGCAGCA ATTTGCCAGA GTCCACGATG AGCTAGGCGG TAAGGCTGGC
GACGCGCCCT ATTTTCCCGA GCCTGTGGTG CACGACAAGC CATTAGCAGA GCTGTTACGC
CTCACCTTCG ACACATTAAG TAGCTCTGAT AATGCCCTGC TACGTGAGAG TCTTATCTAC
ACCAGCCTGG CGCGCCTGAT GTCCCATCAT GGCGCAAGTC GCCCGGTCGA GAAGTCGCTG
CGGCCAACGG CGCACCTGGC ACTGGTAAAG CAGTTTCTGG ATGATATGCC CACCGCCGAT
GTCTCCCTCG ATGCGCTGGC CAAACTGGCG GGCCTTAGCC CCTTCTATCT GATCAAGCAG
TTCCAGCGCC AGTATGGCCT GCCACCCCAC GCCTACCAGA TCCAGGGGCG TATTCGATTG
GCCAAACAGA TGATCCGCCA GGGATGCAAG CTGCTGGAGG TGGCGCTAGC CTGTGGTTTT
CACGATCAGA GTCACCTCAA TCGTCACTTC AAACGCGCCA TGGGCGTCAC CCCGGGCCAG
TATGCCAGAG AGGTCGAAGA CTGTAGGGCA AGAGGCTAA
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| Protein sequence | MKSPATESTT KHAADPQRLG RKSAKAQAIA REKQQTKEQA NFSLAKELGG IELLDASYHQ
QNFSRHSHEG YTVGVIETGA QRFYRTGGDH TAPQHSIILV NADEVHNGRS ATDFGWSYRA
MYPLPQQFAR VHDELGGKAG DAPYFPEPVV HDKPLAELLR LTFDTLSSSD NALLRESLIY
TSLARLMSHH GASRPVEKSL RPTAHLALVK QFLDDMPTAD VSLDALAKLA GLSPFYLIKQ
FQRQYGLPPH AYQIQGRIRL AKQMIRQGCK LLEVALACGF HDQSHLNRHF KRAMGVTPGQ
YAREVEDCRA RG
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