| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2534 |
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| Symbol | |
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| ID | 4921239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2991493 |
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| End bp | 2992638 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164128 |
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| Product | glycerate kinase |
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| Protein accession | YP_001094659 |
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| Protein GI | 127513462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1929] Glycerate kinase |
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| TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG TCATCGCGCC CGATTCATAT AAAGAAAGTT TGAGCGCCAT GGAAGTCGCC
ACCGAGATAG CCCGGGGGTT TTGTGAGGTG CTTCCCGACG CCGAATATAT CAAATTGCCG
GTCGCCGACG GCGGCGAAGG CACGGTGCAA TCTATGGTGG ATGCCACCGG CGGCAAATTA
GTCGAACTTA AGGTCACCGG CCCCCTGGGC AGTCAGGTGG ATGCCCACTA TGGCTTGCTG
GGCCAGGAGG CGCCCGGACA GCGCACCGCG GTGATCGAGA TGGCCTCGGC CTCTGGGCTG
CACCATGTGC CGACCCTCTT GCGCGACCCT TTAGTCACCA CCAGCTATGG CACGGGCGAG
CTTATCTGTC ATGCCCTCAA CAGTGGCGTC ACCCATCTGA TCCTCGGCCT TGGCGGCAGC
GCCACCAACG ACGGCGGCGC CGGCATGCTA CAAGCCCTGG GCGCGCACCT GCTGGACAAT
GAGGGCAAGC CCCTAAGGCC CGGCGGCGCG GCGCTTGAGC ACCTCGCCAG TGTCGATATT
GGCGAGCTGC ATCCACGGCT TGCCCAGGTA GAGATTGAGG TCGCCTGCGA CGTAGATAAT
CCACTGTGCG GCGACAAGGG GGCCTCGGCC ATCTTCGGGC CGCAAAAAGG CGCCGATGAG
ATCATGGTCG CCAGATTAGA CAATGCCCTT AGCCACTTCG CCGATATCAC CAGCTCTGTT
GGCCTCAAGG AGTGTCGCAA CATGCCGGGC GCCGGCGCCG CGGGCGGTAT GGGCTTTGCC
ATGCTCGCCT ATCTGGGCGC CAAGTTAAGA CCCGGCATAG ATATCGTCAT GGAGACGGTT
AGGCTGAGCG AACATCTTAA GGGGGCGGAT CTGGTCATCA CGGGCGAAGG CCGCCTCGAC
AGCCAGACCC TGCATGGTAA GACCCCCATG GGCGTCACCC GCGAGGCCAA TAAACAGGGG
ATCCCGGTTA TCGCCATCGC CGGCTGCGTC AGCGAGGATG CCAATGTGCT GCTGGACCAC
GGCATAGACG CCCTGTTTTC CGTGACCCCC AGGGCCTTGC CGCTCGAGGA GGTGCTGGCC
GGCGCCCGTC ATAATCTCTA TAGCTGCGCG GTCAATATCG CCCGTCTCTA TCGTCTGGGG
CGTTAG
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| Protein sequence | MKIVIAPDSY KESLSAMEVA TEIARGFCEV LPDAEYIKLP VADGGEGTVQ SMVDATGGKL
VELKVTGPLG SQVDAHYGLL GQEAPGQRTA VIEMASASGL HHVPTLLRDP LVTTSYGTGE
LICHALNSGV THLILGLGGS ATNDGGAGML QALGAHLLDN EGKPLRPGGA ALEHLASVDI
GELHPRLAQV EIEVACDVDN PLCGDKGASA IFGPQKGADE IMVARLDNAL SHFADITSSV
GLKECRNMPG AGAAGGMGFA MLAYLGAKLR PGIDIVMETV RLSEHLKGAD LVITGEGRLD
SQTLHGKTPM GVTREANKQG IPVIAIAGCV SEDANVLLDH GIDALFSVTP RALPLEEVLA
GARHNLYSCA VNIARLYRLG R
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