| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2533 |
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| Symbol | |
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| ID | 4921238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2990037 |
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| End bp | 2991395 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164127 |
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| Product | gluconate transporter |
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| Protein accession | YP_001094658 |
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| Protein GI | 127513461 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTAG TACTGATCTT GATCGCCGTG ATAGCCTTCA TCGTTATCGC GACATCTAAA
TTTAAGCTTC ACCCCTTCCT AACCCTCATT CTCGCCTCTT TCATCGCCGC CTTTGCCTAC
GGGCTACCCA GTGCCGATGT GGCAAAAACC ATCACCTCCG GCTTCGGCGG TATCCTGGGC
TATATCGGCC TGGTTATCGT GCTGGGTACC ATCATAGGTA CCATATTGGA GAAGAGCGGC
GCGGCCATCA CCATGGCCGA CGTGGTGATT AAGGTGCTCG GAAAGCGCTT CCCGACCCTG
ACCATGTCGA TCATAGGTTA CCTGGTCTCC ATCCCGGTAT TTTGTGACTC GGGCTTCGTG
ATCCTTAACT CGCTCAAGCA GTCGATGGCC AACCGCATGA AGGTATCAAG CGTCTCCATG
AGCGTCGCCC TGGCTACCGG CCTGTATGCT ACCCACACCT TCGTGCCGCC AACGCCCGGC
CCGATTGCCG CCGCGGGTAA CCTGGGGCTG GAGTCAAACC TGGGTCTGGT CATAGGCGTG
GGCATCTTCG TCGCCGCCGT CGCCGCCCTG GCAGGCATGT TATGGGCCAA CCGCTTCGCT
CATGTCGAGC CCGACGGTGA AGGTGCCGAG GAGCTAAAGA ACAATGTGGA AGATTTCGAG
CAGCTCAAGG CTGCCTACGG CGAGCTACCT AGCCCAGCCA AGGCATTTGC TCCCATCTTC
GTGCCAATCT TGCTGATCTG CCTGGGCTCA ATTGCCAAGT TCCCATCACA ACCACTGGGT
GATGGCGCCC TGTTCGATAC CCTAGCCTTC CTGGGTCAAC CGGTAAACGC CCTGATGATA
GGCCTGTTCC TGTCACTGAG CCTGCTCAAG AGTCAGGATA AGATCAAAGA GTTTAGCGAT
CGCATCAGCC ACGGCTTAGT GGTAGCAGCG CCTATCCTGT TGATCACAGG TGCTGGCGGT
GCCTTCGGCG CCGTGCTCAA GGCAACCGAG ATAGGTAACT TCCTCGGTAG CTCACTCTCG
GCGTTAGGCA TAGGCATCTT CATGCCGTTT ATCGTCGCCG CGGCGCTAAA ATCGGCCCAA
GGCTCATCGA CCGTAGCCCT GGTGGCCACC TCGGCCCTGG TAGCCCCTAT GCTTGGCGAT
ATCGGCCTTG CCAGCGACAT GGGCCGGGTA CTGACAGTGA TGGCCATAGG TGCTGGCGCC
ATGACAGTCT CCCACGCCAA CGACAGCTTC TTCTGGGTGG TGACTCAGTT TAGCCGCATG
AGCGTGAAGC AGGCCTACAA GGCGCAAACC ATGGCGACCC TTATCCAGGG TGTCACCGCC
ATGATCCTTG TCTACCTGCT GAGTCTCGTC CTACTCTAA
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| Protein sequence | MSLVLILIAV IAFIVIATSK FKLHPFLTLI LASFIAAFAY GLPSADVAKT ITSGFGGILG
YIGLVIVLGT IIGTILEKSG AAITMADVVI KVLGKRFPTL TMSIIGYLVS IPVFCDSGFV
ILNSLKQSMA NRMKVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIGV
GIFVAAVAAL AGMLWANRFA HVEPDGEGAE ELKNNVEDFE QLKAAYGELP SPAKAFAPIF
VPILLICLGS IAKFPSQPLG DGALFDTLAF LGQPVNALMI GLFLSLSLLK SQDKIKEFSD
RISHGLVVAA PILLITGAGG AFGAVLKATE IGNFLGSSLS ALGIGIFMPF IVAAALKSAQ
GSSTVALVAT SALVAPMLGD IGLASDMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM
SVKQAYKAQT MATLIQGVTA MILVYLLSLV LL
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