Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2532 |
Symbol | |
ID | 4921237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2988971 |
End bp | 2989774 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164126 |
Product | peptidase C26 |
Protein accession | YP_001094657 |
Protein GI | 127513460 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAA CACAGACTAC AAGTGCTAAG AAATCCAAAC CAATTATCTT GATGACCATG GGTCAGCAAG ACAGGAACCA GCATCCCTAC CAGGTGATGA CCCACAAATA TATGCAGCCG ATTGTGGAGA TCGCCGGGGC CATCCCGCTG CTGATGCCCA CCTGTTTCGG CATAGAAGAT GTAGACCGCT ACCTGGATAT GGTCGATGGC GTCTATCTCT CGGGCGCGGG CTCCAATATC GACCCTAGCC TCTATGGCCA GGAAAACCTC ACCCCGGAAA AAAGCCAAGA TGTAAATCGC GACACCGTCG ATCTGGCCAT CATAGCCGGC GCCCTCAAGC GTAAGTTGCC TATCTTAGGG ATCTGCCGCG GCATGCAGGA GCTCAATATC GCACTGGGTG GCACCCTGTA TCAGAAGGTC TATAGCGAGC CAGGTTTCGA TGATCACCGT GAAGATCCAC AGACCCCAAA CCATGTGCAA TATGGCCCAA GACACCCCAT CAAGACGGTG CCCGGCAGTT GGCTGGCCAA GCTGATTGGC GATAAGACCA TGGTCAACTC CCTCCACGGC CAGGGGATCT GTACCCTGGG CAAGGGGCTA GAGGCATTAG CCTATGGCGA AGATGGCCTG ATCGAGGCGA TCCATGGCCC GGACTATGGT CAGTTTATCC TCGGCGTACA GTGGCACCCC GAGTGGCAGG CTAATGACAA CCCGGATTCA ATCAAGCTGT TCCAGGCCTT CGGCAGCGCC TGTCGCGGCG AGGTCAGCTG GCAATCGGCC AACGACGCTA AATTAACCGC CTAA
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Protein sequence | MPITQTTSAK KSKPIILMTM GQQDRNQHPY QVMTHKYMQP IVEIAGAIPL LMPTCFGIED VDRYLDMVDG VYLSGAGSNI DPSLYGQENL TPEKSQDVNR DTVDLAIIAG ALKRKLPILG ICRGMQELNI ALGGTLYQKV YSEPGFDDHR EDPQTPNHVQ YGPRHPIKTV PGSWLAKLIG DKTMVNSLHG QGICTLGKGL EALAYGEDGL IEAIHGPDYG QFILGVQWHP EWQANDNPDS IKLFQAFGSA CRGEVSWQSA NDAKLTA
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