| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2531 |
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| Symbol | |
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| ID | 4921236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2986836 |
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| End bp | 2987738 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164125 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001094656 |
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| Protein GI | 127513459 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCC ACATCTCGCT CAAGCAACTC AAGGTCTTTA GCACCCTCAC CCAACACAAG
ACCCTAACGG CCGCGGCCGA CGGCCTGTTT CTCTCCAAGG CGGCGGTGAG TATGGCGCTG
TCGGAGCTTG AGAAGCAGCT CGGCCACAAC CTGTTTGACC GGGTGAACAA CCGTCTCATC
CTCAATCAGG AGGGACACAA GTTGCAGCCT CTGGCCGATG AGCTCCTACA CAGAGCCGGC
GATATCGAGC AGCTGTTTAA CGATGAACAG TCACTCTCGG GTCTGCTGCG CATCGGTGCC
AGTGATACCT TGGGCAATCA GGTGGCCCCC TATCTGCTGA GTGACTTTCG CCGACATACC
CAGCACGAAT TGCAGAGCCT GTTTATCTCT AACTCGACGC AGATCTGCGA TATGCTGATC
GCCTACGAGC TGGATATCGC GCTGATCGAG GGTAAGATCC AGCACCCAGA ACTCGATGCA
ACCCCCTTCA GCTCAGATGA GATGTGCGTG ATCTGCCCGC CAGATCATCC CCTGCCAGCA
GATAGCGATA TCCCCTTGCA TCACCTCGAG GCCAGTCACT GGATCCTGCG CGAAGCCGGC
TCAGGCTCCA GGGAATTTTT CCTGCGAGTC GTCGCCCCGA GGCTAGAGCA ATGGCATGAA
GCCTTTCAGC TCAACAACAC AGAGGCCCTG ATCAACTCGG TCTCGGCCGG CCTTGGCCTC
GCCTGCCTGT CACGCTTGTC CGCCGAACCG GCGATCCGCG ACGGACGAGT AAAGGTACTT
AGCCTGCCGC TAAACATGAA GCGCCGCTTC TGGTTACTGG TCCACAAGGA GAAGTATCTG
AGTCCACTAC TGAAGACCTT TATCGCCTTC TGTCATGACT GGGAGCGGGA ACATCAGCTG
TAG
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| Protein sequence | MASHISLKQL KVFSTLTQHK TLTAAADGLF LSKAAVSMAL SELEKQLGHN LFDRVNNRLI
LNQEGHKLQP LADELLHRAG DIEQLFNDEQ SLSGLLRIGA SDTLGNQVAP YLLSDFRRHT
QHELQSLFIS NSTQICDMLI AYELDIALIE GKIQHPELDA TPFSSDEMCV ICPPDHPLPA
DSDIPLHHLE ASHWILREAG SGSREFFLRV VAPRLEQWHE AFQLNNTEAL INSVSAGLGL
ACLSRLSAEP AIRDGRVKVL SLPLNMKRRF WLLVHKEKYL SPLLKTFIAF CHDWEREHQL
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