| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2526 |
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| Symbol | |
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| ID | 4921231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2979407 |
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| End bp | 2980396 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164120 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_001094651 |
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| Protein GI | 127513454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCA CAAATCAATT CAAAAGCCTG TTTCCGGCGG TGATGGCGGC AGCGCTACTT
ACCCTTGGCA TAAGCCAGGG CGCGGTGGCG TCCAAGTGGG ATGCCAAGAT GACCCCGGAC
GAGGTGGAAG CCACCCTGGA CAAGAAGTTC GCCGAAGGCC AGTACTCGCC TAAGGGCGCC
GACTCTTGTC TCATGTGTCA CGGCAAATCT GAAAAAGTCA TGGACCTGTT CAAGGGCGTA
CACGGCGCTG CCGACTCGAG CAAGAGCCCG ATGGCCGGCC TGCAATGTGA AGCCTGCCAC
GGCCCTATGG GTAAGCATAA CCGCGGCGGT AACGAGCCGA TGATCGCCTT CGGTCCCGAC
TCTACCCTGT CTGCCGAGAA GCAAAACAGC GTCTGTATGA GCTGTCACAA AGATGACAAG
CGCATGGCCT GGAACGGCGG TCACCATGAC AACGCCGATG TGGCCTGTGC CTCTTGTCAC
TCGGTGCACA CAGATAAAGA TCCTGTGCTC TCTAAGAACA CAGAGATGGA AGTCTGTACC
AGCTGTCACA CCAAGCAAAA AGCCGACATG AACAAACGCT CTTCTCACCC AATGAAGTGG
GCGCAGATGG TCTGTAGCGA TTGTCACAAT CCACACGGTA CCCTGTCGGA CTCGGACCTG
GTCAAGCCCA GCGTTAACGA AACCTGCTAT TCGTGCCACG CAGAAAAACG CGGCCCAAAG
CTATGGGAAC ATGCGCCCGT AACTGAAAAC TGCGTTACCT GTCACAACCC GCACGGCAGT
GTTAATGAGG GCATGTTGAA GACCCGCGCC CCGCAACTTT GTCAGCAGTG CCACGCTAGC
GATGGCCATG CCAGCAATGC TTACATGGGC AACACTGACC AAGGTTCTAA CGTGGGTGGC
AATGCCTTTA CCGGTGGTCG CAGCTGTCTG AACTGTCACA ACCAGATCCA TGGTTCTAAC
CATCCATCTG GCAAACTATT CCAGCGCTAA
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| Protein sequence | MKITNQFKSL FPAVMAAALL TLGISQGAVA SKWDAKMTPD EVEATLDKKF AEGQYSPKGA
DSCLMCHGKS EKVMDLFKGV HGAADSSKSP MAGLQCEACH GPMGKHNRGG NEPMIAFGPD
STLSAEKQNS VCMSCHKDDK RMAWNGGHHD NADVACASCH SVHTDKDPVL SKNTEMEVCT
SCHTKQKADM NKRSSHPMKW AQMVCSDCHN PHGTLSDSDL VKPSVNETCY SCHAEKRGPK
LWEHAPVTEN CVTCHNPHGS VNEGMLKTRA PQLCQQCHAS DGHASNAYMG NTDQGSNVGG
NAFTGGRSCL NCHNQIHGSN HPSGKLFQR
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