| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2504 |
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| Symbol | |
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| ID | 4921350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2944391 |
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| End bp | 2946256 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164095 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001094629 |
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| Protein GI | 127513432 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00698826 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.693879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA AGATTCGCGA AGGCTCACAG GGCGTGATTG CTAAAGGCAT TCTCGTTCTT
GTCATTTTGT CCTTTGCATT TACTGGCGTG AGTAGCTATT TGGGTTCATC TTCGGAGCCG
AGCGCGGCTA CGGTTAATGG TGAAGAGATC AGTAAATCTG CACTGGAGCA AGCCTATCAA
AGCGAGCGTG CTCGATTAGA GCAGCAACTG GGTGATATGT ACGACACCTT GGCCAGCAAC
GAAAGCTACC TGGCTAGCGT TAAGCAGAAT GTATTAGAGC GCCTGATCGC CGACAAGTTG
GTGGATCAAG CCGCTGCCGA CTTAGGGCTT ACAGTGTCTG ATCAACAGAT CAAGACGGCT
ATCATGAATG AGCCTGCCTT CCAAACCGAC GGTAAGTTTG ACAACGACCG TTACCTAGCC
CTAATCCGCC AGCTAGGCTA TCAAGCCAAC AGCTTCCGCG ACATGATGCG TGGTGACATG
ACTCGTCGTC AGCTAGTAGT GACCGTTGTC GGTTCTGAAT TTGTGTTGCC TGGTGAAGCC
GAGTATCTGG CCAAGATCCA GGGGCAAACC CGTGACATTC GTTACCATGT GGTCGATGCT
GAGCCTATGC TGGCCACTGT AAGCGTAAGT GACGAAGAAG CGAATACCTA CTATCAGCAA
AATCAGTCGC TGTTTGTGCG TCCTGAAACC ATTTCGCTGG ATTATATCGA GCTAAGTGCC
AATCAATTGG CCTCGGCGAT TCAGGTAAGC GATGAAGAAG CTAAGACCTA TTACGACGAG
AACAAGGCGC AGTACCTGCA GCCTGAGAAG CGTCTGGCCG CCCATATTTT GGTGAGCCTG
GGTGATGATG AAGATGCAGC TAAGGCTAAG GCTGAAGCGA TCATGACTAA GCTTAAGGCG
GGTGAAGATT TTGAGGCACT GGCTAAGAGT GATTCAGATG ACAGCTTTAG CGGTGAGCAG
GGCGGTAAGC TGGATTGGTT CGAACAGGGC GTGATGGAAG CGCCTTTCGA CCAGGCGCTA
TTCGCACTGG AAAAAGGTCA GTACTCAGAC ATAGTGAAGA CCAGCTTCGG TTACCACATC
ATCAAGCTGC TCGATCTACA AGCGGCATCG ACCTCGCCAT TCGAGGCGGT AAAAGACAAG
ATCGTTGCCC AGATCCAACA AGACAAGGCA GTTAACGAGT TTTATACCTT GCAACAGCGC
CTGTCTGACG TGAGCTACGA AGTACCCGAT ACCCTAGCCG AAGCGGCTAA AGAAGTGGGT
GTTGCGGTTA AGACCAGCCC TGTATTTACT CGTGACAATG CGCCAGAGCC ACTAAACTCT
GCCGATGTGC TTAAGGCGGC CTTCTCTAAC ACGGTTCTGC TCGATGGCAT GAACAGTGAT
GTGATCGAGT TGGGTGATAA CCATGTGGTC GTGGTGCGAG TGAACAAGCA CGCTGCGGCG
GGCACCATGG AGTTTGCCGA CGTGAAGGCG ACCATTGTCG AGCGTCTCAA GCAAGACAAG
GCTAACGAGC TGGCACGCGA CAAGGCGCAA GAGATGATGG CAGCCATCAA GGGCGGTGAG
ATCCCGGCCG AGATGATCAC TCGCACTCAG CTAAGCCGTG GCGAGCAAGG CATAGATACC
TCTATCGTTA GCAAGGCGTT CGAGATGGCC CAGCCAGCCG AGCAGTTTGT GGTTGATACC
GCAGCCCTGG CTAACGGCTA TGCCGTGGTG ATTCTCGATA AGGTGAATCA AGCCGAGAGC
GTAGATGAGA GCCTGGTAAC AGCCCTTAAG CAACGTTTGA ACTCTCAGTA CAGTGAGAAC
GACTACCGCG CGCTTATCGC CGCGCTGAAG GCTCAGGCGG AAGTGGTTTA CACGCCAGCC
GAATAA
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| Protein sequence | MLEKIREGSQ GVIAKGILVL VILSFAFTGV SSYLGSSSEP SAATVNGEEI SKSALEQAYQ
SERARLEQQL GDMYDTLASN ESYLASVKQN VLERLIADKL VDQAAADLGL TVSDQQIKTA
IMNEPAFQTD GKFDNDRYLA LIRQLGYQAN SFRDMMRGDM TRRQLVVTVV GSEFVLPGEA
EYLAKIQGQT RDIRYHVVDA EPMLATVSVS DEEANTYYQQ NQSLFVRPET ISLDYIELSA
NQLASAIQVS DEEAKTYYDE NKAQYLQPEK RLAAHILVSL GDDEDAAKAK AEAIMTKLKA
GEDFEALAKS DSDDSFSGEQ GGKLDWFEQG VMEAPFDQAL FALEKGQYSD IVKTSFGYHI
IKLLDLQAAS TSPFEAVKDK IVAQIQQDKA VNEFYTLQQR LSDVSYEVPD TLAEAAKEVG
VAVKTSPVFT RDNAPEPLNS ADVLKAAFSN TVLLDGMNSD VIELGDNHVV VVRVNKHAAA
GTMEFADVKA TIVERLKQDK ANELARDKAQ EMMAAIKGGE IPAEMITRTQ LSRGEQGIDT
SIVSKAFEMA QPAEQFVVDT AALANGYAVV ILDKVNQAES VDESLVTALK QRLNSQYSEN
DYRALIAALK AQAEVVYTPA E
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