Gene Shew_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2503 
Symbol 
ID4921349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2942696 
End bp2943898 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content54% 
IMG OID640164094 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_001094628 
Protein GI127513431 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.214171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.292371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATCA AACCCAAAAC ACGTGGCTTT ATTTGTACCA CCACTCATCC GGTTGGCTGT 
GAAGCAAATG TACTAGAGCA AATCAACATC ACTAAGGCAA AAGGCCCTGT CGCCAACGGC
CCTAAGAAAG TATTAGTGAT CGGCTCTTCA AGTGGCTATG GTCTATCTTC ACGCATCGCG
GCAGCCTTTG GCAGCGGCGC GGCAACCCTC GGCGTCTTTT TTGAAAAACC AGGCACCGAG
ACTAAGCCAG GTACGGCTGG CTGGTATAAC TCAGCGGCCT TCGACAAGTT TGCAAAGCAA
GGCGGCCTCT ATTCTAAGAG CCTGAACTGT GATGCCTTCA GCCATGAAGC CAAACAGAAA
GCTATCGAGC TGATCAAGCA AGATCTGGGT CAGGTAGACA TGGTCGTCTA CTCACTGGCC
TCTCCGGTAA GAAAACTGCC TGACAGCGGC GAGCTGATTC GCTCATCACT GAAGCCGATT
GGCGAGACAT ACAAGTCTAC CGCGGTTGAT ACCAACAAAG ATCTGATCAT CGAAACCAGC
GTAGAGCCGG CCACAGAGCA AGAGATTGAA GATACTGTTA CCGTCATGGG CGGTCAGGAT
TGGGAACTGT GGATCAATGC CCTGGCCGAG GCTGGCGTAC TGACTCCAGA TTGTAAGACA
GTTGCCTACA GCTACATAGG CACAGAGCTG ACCTGGCCTA TCTATTGGCA CGGTGCCCTG
GGCAAGGCCA AGATGGACCT TGACCGCGCC GCGCACGCAC TCAACGACAA GCTATCGGCC
ACAGGTGGTA GCGCCAACGT CGCCGTGCTC AAGAGTGTGG TTACTCAGGC CAGCTCGGCC
ATCCCTGTAA TGCCACTCTA CATCGCCATG GTATTTAAGA AGATGCGCGA AGAGGGTCTG
CACGAAGGCT GTCAGGAGCA GATCAACCGT ATGTTCCACG AGCGCCTTTA CCGCGCCGAC
GGTGCAGCAC CGGCAGTCGA TGATGCTAAC CGCCTGCGTC TGGACGACTG GGAGCTTCGT
GACGAAATTC AGCAGCACTG CCGCGACCTA TGGCCGACCA TCACCACAGA GAACCTCAGC
GAACTCACGG ACTACCGTGA GTACAAGGAA GAGTTCCTCA AGCTGTTCGG CTTCGGTATC
GAGTCTGTAG ACTATGACGC CGATGTGAAC CCAGAGGTGA ACTTCGACGT CGAGCAGTTC
TAA
 
Protein sequence
MIIKPKTRGF ICTTTHPVGC EANVLEQINI TKAKGPVANG PKKVLVIGSS SGYGLSSRIA 
AAFGSGAATL GVFFEKPGTE TKPGTAGWYN SAAFDKFAKQ GGLYSKSLNC DAFSHEAKQK
AIELIKQDLG QVDMVVYSLA SPVRKLPDSG ELIRSSLKPI GETYKSTAVD TNKDLIIETS
VEPATEQEIE DTVTVMGGQD WELWINALAE AGVLTPDCKT VAYSYIGTEL TWPIYWHGAL
GKAKMDLDRA AHALNDKLSA TGGSANVAVL KSVVTQASSA IPVMPLYIAM VFKKMREEGL
HEGCQEQINR MFHERLYRAD GAAPAVDDAN RLRLDDWELR DEIQQHCRDL WPTITTENLS
ELTDYREYKE EFLKLFGFGI ESVDYDADVN PEVNFDVEQF