| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2502 |
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| Symbol | |
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| ID | 4921348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2941806 |
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| End bp | 2942591 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164093 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001094627 |
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| Protein GI | 127513430 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.143761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.275923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCC CCTTACTAAA AGTTAATCGA CTCAGTAAAA CCTTTTTCGC CGGCTATAAG
GGATTTAAGC GCCAGTATAA CCATGCCCTC GAGCCCATCT CCTTCGAGCT TAATCGCGGC
GAGACCCTGG CAATTGTGGG CGAAACCGGC TCGGGCAAGA GTACCCTGGC GCGTATCTTG
GTGGGCGCAG AGCAGCGCAC CGATGGCGAG ATCTTGTTTG AAGGCGAAGC GCTGGAAAGC
CGCAACCTGA AGCAGCGTTG CAGGCTCATT CGGATGATTT TCCAAGACCC CAACACCTCG
CTCAACCCGC GCTTGACTGT GGGTGAGCTG CTGGATGAGC CCTTAAGGTT CAATACGGAT
CTGGACAAGC AGGCACGCTT CGCTCAGGTA GTGGATACCC TGCGCAAGGT TGGCCTGCTG
CCAGAGCACG CCGACTTCTA TCCTCACATG ATCTCAGAGG GGATGAAGCA GCGGGTAGCG
GTGGCCAGGG CCTTGATGTT GAACCCAAAA ATTATCATTG CCGACGAGGC GTTGACGGCG
CTGGATCTCT CGGTACGCTC GCAGATTTTG AACCTGTTGC TCAAGCTGCA GCAGGAGATG
GGACTCTCTT ACATCTTCGT GTCTCACAAC ATGAATATCA TTCGCCATTT CAGCGATAAG
ATCATGGTAT TGCACCAGGG CAAGATGGTG GAAAAGGCCA CCACGGAGAA GCTGTTTAAC
GCCCCCGAGC ATGAATATAC CCAGCGGCTT ATTCAGGAAC AGACCATGTT TTCCTACAAG
CGTTAA
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| Protein sequence | MKSPLLKVNR LSKTFFAGYK GFKRQYNHAL EPISFELNRG ETLAIVGETG SGKSTLARIL
VGAEQRTDGE ILFEGEALES RNLKQRCRLI RMIFQDPNTS LNPRLTVGEL LDEPLRFNTD
LDKQARFAQV VDTLRKVGLL PEHADFYPHM ISEGMKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQQEM GLSYIFVSHN MNIIRHFSDK IMVLHQGKMV EKATTEKLFN
APEHEYTQRL IQEQTMFSYK R
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