| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2494 |
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| Symbol | |
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| ID | 4921340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2934593 |
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| End bp | 2934988 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164085 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001094619 |
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| Protein GI | 127513422 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0781423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT CTAAGGGACG ACCCTTATAT CGAATCCCCG AGTCAGGCAA GATAGCTGGA
GTGTGCGCAG GGATAGCGGA CTACTTCAAC TTCGAAACCT GGTTGGTCAG AGTGGTCGCC
GCATCGATAT TTTTGCTTGG GGGATCGGGG GTTATTCTTA TCATCTACGT ACTACTCTGG
ATGATCTTGG ATATCAAACC TGGCAGCGCA AAGAACAAGC AACAACACAA GGAGATCGAG
GTGAAGAAGA AGGTATGGCA GGCAGGAGAG CCGGCTAAGG CCGCCTTAAG AGACGTTAAC
AACCAGTTCC GTGATTTAGA ATTCAGGTTG CAAAATCTCG AACGGCACGT CACCTCGGAC
AGCTTCGATC TTAAACAGCA GATCAACAAT CTTTAA
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| Protein sequence | MSESKGRPLY RIPESGKIAG VCAGIADYFN FETWLVRVVA ASIFLLGGSG VILIIYVLLW
MILDIKPGSA KNKQQHKEIE VKKKVWQAGE PAKAALRDVN NQFRDLEFRL QNLERHVTSD
SFDLKQQINN L
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