| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2491 |
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| Symbol | |
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| ID | 4921386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2930577 |
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| End bp | 2931752 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164082 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001094616 |
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| Protein GI | 127513419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0409606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATA AATGGAAACT TGCCACTCAG GTGATCCATG CTGGGCATGA GGCCAATCAG
CATGGCGCCT TGGTATCCCC TTTGGTGCAA AGCGCCACCT TTACCTTTGA GACAGTCGAG
CAGGGCGGTG ATTGCTTTGC CGGCGAACAA CAAGGCTATA TCTACACTCG CCTTGGCAAT
CCCACCACGG CAGAGCTAGA ACGTAAGATG GCGGTGCTGG AAGGCAGTGA AGCCGCAGCC
GCGACCGCCT CCGGCATGGC GGCGGTATCT GCGGCCCTGC TGACCAATCT GAGCCAGGGC
GACCACCTGG TCGCTTCCAA GGCTGTCTAT GGCTGTACCT TTGCCCTGAT GACGGAGCAG
TTTAAGCGCT TTGGCATAGA GGTGACCCTG GTGGATTTCT GCGAGGTGGC CAACATAGCT
CAGGCCATTC GCCCCAACAC TAAGGCGCTG TTTTGCGAGA CGCCTGTTAA TCCACATCTG
GATGTCTATG ATCTCGCCGC CATTGCTGCA CTGGCCAAGC GCCATCAGCT GGTCAGTATC
GTCGACAACA CCTTTATGAC GCCACTGTTG CAACGCCCGC TGAGCATGGG TATAGACATG
GTGATCCACA GTGCGACTAA GTATCTCAAC GGTCATGGTG ACGTGATCGC CGGAATCGTC
TGTGGCACCG AGGAGATGAT CACTAAGGTC AAACTTGAGG TGCTCAAGGA TATCGGCGGG
GTGATCTCGC CTCACGATGC CTGGCTGATC TTACGCGGGC TGAAGACGCT AGATGTCAGA
TTAGCGCGCC ACTGCGACAA CGCCGAGCGG GTCGCCGAAT ATCTGCAGCA GCACCCTCAG
GTGGCCAGAG TCTATTATCC TGGCCTCAAG GGACATTCGG GCCATGCCCT GCTGGGTAAG
CAGATGCTCA GGGCCGGCGG TGTGGTCGCC TTCGAACTCA AAGGCAGCTT CGATGCCGCC
AAGGCGTTCG CTAATCGACT CAAGCTCTTT AAAATTGCGG TCAGTCTGGG GGATGCCGAG
TCGTTGATCC AGCATCCTGC CTCTATGACG CATTCCCCCT ATTCGCCAGA GGCCAGAATG
GACGCCGGCA TAGGCGATAG CCTGTTGAGG ATCTCCCTAG GCCTGGAAGA CAGCGATGAC
ATCATTGCCG ATCTGGCGCA GGCCTTCGGG GAATAG
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| Protein sequence | MQDKWKLATQ VIHAGHEANQ HGALVSPLVQ SATFTFETVE QGGDCFAGEQ QGYIYTRLGN
PTTAELERKM AVLEGSEAAA ATASGMAAVS AALLTNLSQG DHLVASKAVY GCTFALMTEQ
FKRFGIEVTL VDFCEVANIA QAIRPNTKAL FCETPVNPHL DVYDLAAIAA LAKRHQLVSI
VDNTFMTPLL QRPLSMGIDM VIHSATKYLN GHGDVIAGIV CGTEEMITKV KLEVLKDIGG
VISPHDAWLI LRGLKTLDVR LARHCDNAER VAEYLQQHPQ VARVYYPGLK GHSGHALLGK
QMLRAGGVVA FELKGSFDAA KAFANRLKLF KIAVSLGDAE SLIQHPASMT HSPYSPEARM
DAGIGDSLLR ISLGLEDSDD IIADLAQAFG E
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