| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2482 |
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| Symbol | |
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| ID | 4921377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2919819 |
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| End bp | 2922206 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164072 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001094607 |
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| Protein GI | 127513410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.205655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00219855 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGTAA AAGGGCGGAT CTTAACCCGT CACCACCAAG GCAGCGAATT ACATTATTAC
CTTAGTACGG CTGAAGGGCC GGCTCGGGTC ATAGTGCCCA ATGGCGAGCG CATCTGTTTT
TGTCGCACTC AGGATGAGTT GCGCCTGCTC GGAGACAATC GTGAGAGTGG GATACGCAGT
GAGGCGCTTA ATCTGACCAC CTTCCAAGAT GAACCGGTCA GCGCACTCTA TTTCGCTAAT
AATCAAAGCT TTCGTCATCT CAGTCGTATC GCCACCGATA AGGGGATCTC CCTTTATGAG
TCTGAACTCA GGGCCGAGCA GCGTTATCTC ATCGAGCGCT ACATCGCCCT AGACGTAGAG
TTTATCGGCC GCTGGCAAAG CCAAGCACTA GACACGCCTA CGCTCATCGC CGAGCGGGCC
AGACGCAGTG AGCTAGATGT TAATCGAGAA GTTAAGCTGG CTGTGGTCTC GCTGGATTTC
GAATGTGCCA TGGATGGAGA GCTTTTTAGT GTCGGGCTGT ACGGCCAATC GGCCAGCGGC
GAGCCCTATC AACAGGTGAT CATGGTGGGG GAAGCGTGTG ACTCGCCGCC TGAGTATCTC
TCACTTGTGC CCAATGAGGC GGCATTAATT AAGTCGCTGC TGGATTGGTT TAAGCTCAAT
GATCCCGACA TCATCATAGG CTGGGCGGTA GTGACCTTCG ACCTGGCGCT CTTGTATCGC
AGGGCCAGGG CGCTCAATAT TCCGCTGACG CTTGGCAGGC TAGGCACTCA GCTTTCTTGG
CGGGTCGATA ACAAATATCG ACCCGAGACC TTAATCTTGC CTGGGCGTGT GGTGCTCGAT
GGCATCGACT GGCTCAAGGC GGCCTTCTAT CAGTTTGACA GTTTTAGTCT GGAATCTGTC
GCCAGAGAGT TACTCGGTGA GGGGAAGGCG ATTCACAACG TCAGTCACCG CGCCGAGGAG
ATAGCGACCC TGTTTCGTGA GGATAAGGCG GCGCTGGCCC ACTACAATAT TACCGACTGT
CGCCTGGTGT GGGAGATCTT TGCCAAAACC GATCTGTTGG CATTTGTGAT GGAGCGTTCG
CGTCTAACCG GCTTAGAGCT TGGCCGGGTC GGCGCCTCGG TGGCCGCGTT TAATAATCTT
TATCTGCCCC ATCTGCACCG CGCCGGCTAT GTCGCCCCCA GCGTGCCGGT CAGCGATGGC
ATAGAGAGCC CAGGCGGCTA TGTGATGGAC TCTAAACCGG GTCTCTATCA ACATATATTG
GTGCTCGATT TTAAGAGCCT TTATCCCTCG ATCATCAGAA CGTTTTTGAT TGACCCAAAG
GGGTTGGTGG AAGGATTAAA AGCAGAGGCT AATGCCGGGG TAAAGGGAGT AAGAGAAGGC
AATGACACCG TGCCTGGCTT TTTGGGCGCC CAGTTTAGTC GCAACTCGCC TATTCTGCCC
GAGCTTATCG CCAGCCTGTC TGCCAAGCGC GAAGAAGCCA AGCGCGAAGC CAACGCCCCC
CTGTCGCAGG CGATAAAGAT CATCATGAAC TCCCTATACG GCGTGCTGGG GTCTCGCGGC
TGCGTATTCC ACGATGCGCG CCTGGCAAGC TCAATTACCC TTAGGGGTCA TGAGATCATG
AAGCAGACCA AGCAATGGAT TGAGGCGTTG GGCTTGACCG TTATCTATGG TGATACCGAC
TCTACCTTCG TGCATATCTC CTCGCCCGAG CGTGTCGGTG ATATCAATGC CTTTGCCAGG
GAGTTGGTCG CATCGATCAA CGAGAAATGG CGACTCAAGC TCAAGCAGGA GTTTCAGTTA
GAGTGTTACC TCGAGCTTGA ATATGAGCGA CATTTTGAGC AGTTCTTCAT GCCGACACTG
CGTGGCTCTA CCGAAGGCTC CAAGAAGCGT TATGTGGGCG CCTATCGTCA GGAAGACCAA
AGCCTCAAGC TGGTGTTCAA GGGGATGGAG CAGGTGAGGA GTGACTGGAG CCCCTTGGCG
CGGGAGGTAC AGGCCGAGCT CTATTATCGA CTGTTTGCCA AGCAGGATGT GCTCGGCTAT
TTAAAACAAA TTGTGGATGC GCTGCAGCGG GGAGAACTCG ACGACAGGCT GATTTTTTCT
AAACGCCTTA GGCGCAACAT CGAAGACTAT ACCGCTAAGT CATCACCCCA CGTGAAGGCG
GCGACTCTCT GGTGTCAGCG AAGTGGCAAT GACAGTCATG GCAAGCGGGG CGAAAAAATA
AGCTATCTGA TGACACAAAA CGGCGCAGAA CCTGTACAGC ATCTACTCGG AAAGATCGAT
TATCAGTATT ATCTGGATAA ACAGATCGCC CCCATTTCTG ATCCCATACT TTCAATTTTA
AACACTAGTT TCAATAATCT TGTGGCCAAG CAAATGTCGT TAATTTAG
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| Protein sequence | MSVKGRILTR HHQGSELHYY LSTAEGPARV IVPNGERICF CRTQDELRLL GDNRESGIRS
EALNLTTFQD EPVSALYFAN NQSFRHLSRI ATDKGISLYE SELRAEQRYL IERYIALDVE
FIGRWQSQAL DTPTLIAERA RRSELDVNRE VKLAVVSLDF ECAMDGELFS VGLYGQSASG
EPYQQVIMVG EACDSPPEYL SLVPNEAALI KSLLDWFKLN DPDIIIGWAV VTFDLALLYR
RARALNIPLT LGRLGTQLSW RVDNKYRPET LILPGRVVLD GIDWLKAAFY QFDSFSLESV
ARELLGEGKA IHNVSHRAEE IATLFREDKA ALAHYNITDC RLVWEIFAKT DLLAFVMERS
RLTGLELGRV GASVAAFNNL YLPHLHRAGY VAPSVPVSDG IESPGGYVMD SKPGLYQHIL
VLDFKSLYPS IIRTFLIDPK GLVEGLKAEA NAGVKGVREG NDTVPGFLGA QFSRNSPILP
ELIASLSAKR EEAKREANAP LSQAIKIIMN SLYGVLGSRG CVFHDARLAS SITLRGHEIM
KQTKQWIEAL GLTVIYGDTD STFVHISSPE RVGDINAFAR ELVASINEKW RLKLKQEFQL
ECYLELEYER HFEQFFMPTL RGSTEGSKKR YVGAYRQEDQ SLKLVFKGME QVRSDWSPLA
REVQAELYYR LFAKQDVLGY LKQIVDALQR GELDDRLIFS KRLRRNIEDY TAKSSPHVKA
ATLWCQRSGN DSHGKRGEKI SYLMTQNGAE PVQHLLGKID YQYYLDKQIA PISDPILSIL
NTSFNNLVAK QMSLI
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