| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2477 |
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| Symbol | |
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| ID | 4921145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2911186 |
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| End bp | 2912541 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164067 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001094602 |
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| Protein GI | 127513405 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.373641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000065853 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGT TAATCTCTAC AGCAATCGTT GCTGCAAGTC TGTCTTTAAC TGCTGGCATG
GTGAGCGCTG CTGATGCGCC TAAGAACATC GACCAGCTAC TTAAGCAAGT TCAAACCGAT
CGTGCTAACG CTGCTAAAGT AAACAAGAAG CGTGAAGCCG AGTTCCAAGC CGAGCGTGGC
GATAAAGCTG CACTGCTAAA GCGTGAAAAA GCGGCTCTAG CGGCTGAAGA ACAACGCGGT
AAAGATCTTT CTCAAGCATT TGCCGATAAC GAGCGTAAAA TCGCTCAGTT AGAAGAAGAC
CGTAAGATTG CTCAAGGTGA CTTGGGTGAG ATGTTCGGTG TTGTTAAAGG TGAAGCCGGT
GATTTCGCTG GTAAGCTTGT TTCATCAAAC GTTAGCGCTC AGTTCCCTGG TCGTGATGCT
TTCATCGCCG AGCTAGGTGC ACGTAAAGAG CTGCCAAAAA TCGAAGAGCT AGAAAAGTTC
TGGGAAGAGC AGCTATTCGA AATGGCTGAG TCTGGCAAAG TGGTTACTTT TGAAGGTGCC
GTAACGGGTA TCGACGGTAA CGTTCACAAC ACCAAGATCA CTCGTGTTGG TGCTTACAAC
CTGCTAGCCG ATGGCCAGTA TGTTGTTTAT AACGCCGATC TAGGTCTGGT TCAGCAGCTT
TCACAACAGC CTGGTAGCGA GCAAGTTGCC AGCGTTAAAG ACTTTGAAGG TCAAACTTCA
GGCGTTCACA AGCTGTTTGT TGACCCTGCA CGTGGTGTAC TGCTAAACGT GTTCACTCAG
AAGGCAACTA TCGAAGAGCG TATCGAAGCC GGTGGTACTA TCGGTTACAT CATCATCGGT
CTGCTTGTTC TTGGTGCCCT GATCTCTATC GAGCGTCTGG TGACTCTGTA TGTTGTTGGC
GCGAAAGTTA ACGCACAACG TAAGAACATC GACAACCCAG GTAACAACCC ACTGGGTCGT
GTACTTAAGG CATACCACGA TAACAAAGAT GTTGACGTTG AAACGCTTGA GCTGAAACTT
GACGAAGCGA TTCTGAAAGA AACTCCAGCA CTTGAGACTC GTATCTCTAT CATCAAGGTT
CTAGCGGCTA TCGCACCTAT GATGGGTCTA CTGGGTACAG TAACAGGTAT GATTGCAACC
TTCCAAAGCA TCCAGCTATT CGGTACTGGT GATCCTAAGC TAATGGCTGG TGGTATCTCT
ATGGCACTGA TGACGACCGT ACAAGGTCTG GTTGCTGCAC TGCCACTAAT GCTAATGCAC
GCTATCGTGA TTGCACGTAG CAAGTCAGTT GTTCAAGTAC TTGAAGAGCA AAGTGCAGGT
ATCGTTGCCG AGCACGCTGA GAAGAGGAAC GCCTAA
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| Protein sequence | MKKLISTAIV AASLSLTAGM VSAADAPKNI DQLLKQVQTD RANAAKVNKK REAEFQAERG
DKAALLKREK AALAAEEQRG KDLSQAFADN ERKIAQLEED RKIAQGDLGE MFGVVKGEAG
DFAGKLVSSN VSAQFPGRDA FIAELGARKE LPKIEELEKF WEEQLFEMAE SGKVVTFEGA
VTGIDGNVHN TKITRVGAYN LLADGQYVVY NADLGLVQQL SQQPGSEQVA SVKDFEGQTS
GVHKLFVDPA RGVLLNVFTQ KATIEERIEA GGTIGYIIIG LLVLGALISI ERLVTLYVVG
AKVNAQRKNI DNPGNNPLGR VLKAYHDNKD VDVETLELKL DEAILKETPA LETRISIIKV
LAAIAPMMGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALMTTVQGL VAALPLMLMH
AIVIARSKSV VQVLEEQSAG IVAEHAEKRN A
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