Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2471 |
Symbol | |
ID | 4921139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2905888 |
End bp | 2907723 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640164061 |
Product | hypothetical protein |
Protein accession | YP_001094596 |
Protein GI | 127513399 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000555519 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAACAAAA CGCTTCTCGC ATTGACGATA TCAGCTTTGG TGGCCATGGT GGGCTGCTCA GACAAGGAAA CCAGTGCAAG CCAGGCCAAG ACCTCTGCGC CAGAACAGAC TGTGGCGCCT CAGGTACAAA GCGCCGAGCA GGAATACCTC GCCTTAGTGG ATCGTTATTT CAACGACATG CTCAAACTAG AGCCAATGTA CGCAACATTT GTCGGCGTCA ATGACTACAA CGACCAATTT GGCGGCGATC TGACCGAGGA GTATCTCAAG TCGCGTCATG AGCTTAACAG TCGCTACCTG AAGGCGGTAA AGGCGATAGA TCGCAGCGCC TTACCCGAGC CGCTGCAGCT GAGCTACGAC ATGTTTACCT ATGATAGAAA CATGGCGCTG GTGTCCGAGA CCTTCCCGTC CTATTTCATG CCGATGAACC AGTTCTACAG TACAGTCATT ACCATGGTGC AGCTGGGCAG CGGTGAGAGC GCGCAGCCAT TTAACACGGT TAAAGACTAT GAAAACTGGC TATCGCGTCT ATCGGGCTTC ATCAACTGGA CTAAGTTGGC CCAGGCGCGC ATGGACGAAG GTATCGCCAG CAAGGTTGTG TTACCAAGAG TCTTGGTCGA GCGCATCATT CCTCAGCTGG AGGCCCAGTT GGTCGAGCAG CCGAGTGACA GCCTCTTCTA TGCGCCTATT ACTAATCTGC CAGAGAGCTT TAGTGAAGAG GAGAAGCAGA AGCTGACCCA GCAATATGAC ACTCTGATCG GCAAAGAGCT GATCCCAGCG CTGGCATCGC TCAAGCAATA TTTCCAGGAG ACCTATCTGC CCGTGGCCAG AGCCAGCGAT GGATGGTGGG GACTGCCTAA CGGTAAACTC TGGTATCAGC ATCTAGCCAA CGCTCACACC ACAACCACTA TGCCTGTCGA TGAGATCCAT CAGATTGGCC TTGATGAGGT GGCCCGTATT CTCAGTGAGA TGGATAAGGT GAGAGAGCAG GTTGGCTTCA AGGGCGATCT CAAGGCCTTC TTTGCCTCAC TGTCTTCTGA GCCACAATAC TTCTTTAGTG AGCGTCAGGG GCTGATCGAC GGCTACATGG TACTGAAGGA AAAGATCAAC GCCGTATTGC CTAACTACTT CAATGTCATG CCTAAGGCCG ACTATGTGGT TAAGCCGGTT GAGAGCTTCC GCGAGCAGTC AGCGGCCGGT GCATCTTACG AGGCGCCTGC GGTCGATGGT TCGCGTCCTG GTGTGTTTTA TATCAACACC TACAATCTGA AGGCACAGCC TAAGTGGGGC ATGACGACAC TGTCACTGCA CGAGGCCGCA CCTGGGCATC ACTTCCAGAT CGCCATCAAG CAGGAGCTGA CCGGTGTGCC TGAGTTCCAA CGCTTTAGCG GTTATACCGC CTTCGAAGAG GGCTGGGCCC TGTACGCCGA GTATCTCGGC ATCGAGATGG GCCTGTTTGA AGATCCTTAC CAGTATTTCG GTAAGCTATC CGATGAAATG CTGCGCGCCA TGCGTCTGGT GGTCGACACA GGGCTACATG CCAAGGGCTG GAGCCGTGAG CAGGCGATTC AGTATATGAA GGACAACTCG CCGATGGCCG AGACCGATAT CATCGCCGAG GTAGAGCGCT ACATGGCGAT CCCAGGTCAA GCTCTTTCAT ACAAGGTGGG ACAGCTGAAG ATCTTGGCCC TGCGCGCCGA GGCGGAAAAG GCTTTGGGTG ACAAGTTCGA TCTCAAAGGG TTCCACGATC AGATCTTAAC CTCGGGCTCG CTGCCGATGG CGGTAATGGA GCAAAAAATC CACCGCTGGA TAAAAGCTCA GGGCGCTAAG GCATAA
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Protein sequence | MNKTLLALTI SALVAMVGCS DKETSASQAK TSAPEQTVAP QVQSAEQEYL ALVDRYFNDM LKLEPMYATF VGVNDYNDQF GGDLTEEYLK SRHELNSRYL KAVKAIDRSA LPEPLQLSYD MFTYDRNMAL VSETFPSYFM PMNQFYSTVI TMVQLGSGES AQPFNTVKDY ENWLSRLSGF INWTKLAQAR MDEGIASKVV LPRVLVERII PQLEAQLVEQ PSDSLFYAPI TNLPESFSEE EKQKLTQQYD TLIGKELIPA LASLKQYFQE TYLPVARASD GWWGLPNGKL WYQHLANAHT TTTMPVDEIH QIGLDEVARI LSEMDKVREQ VGFKGDLKAF FASLSSEPQY FFSERQGLID GYMVLKEKIN AVLPNYFNVM PKADYVVKPV ESFREQSAAG ASYEAPAVDG SRPGVFYINT YNLKAQPKWG MTTLSLHEAA PGHHFQIAIK QELTGVPEFQ RFSGYTAFEE GWALYAEYLG IEMGLFEDPY QYFGKLSDEM LRAMRLVVDT GLHAKGWSRE QAIQYMKDNS PMAETDIIAE VERYMAIPGQ ALSYKVGQLK ILALRAEAEK ALGDKFDLKG FHDQILTSGS LPMAVMEQKI HRWIKAQGAK A
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