| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2465 |
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| Symbol | |
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| ID | 4921133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2901238 |
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| End bp | 2902167 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164055 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001094590 |
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| Protein GI | 127513393 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000370846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGATGA ACCAACTGAT ACTCCCGCCC CTAAATGCCC TGCGTGCCTT CGAGTCGGCG
GCAAGACACC TAAGCTTTAC CCGCGCCGGG AATGAACTCT TTGTCACCCA TGGCGCCATC
AGTAAGCAGA TAAAAACACT AGAGTCTTAC TTAGATGTCA GCCTTTTCAA CCGCCAGCAT
AAACAGCTCA GCCTCACGCC TGAGGGCGAG CGTTATCTGC GCCATATCAG CAGCGCACTG
CAAAGCATCA GCCAGGCCAC AGAGGAGTTA AGGTCACAAC CGGGTATCGC GCAGGCGCTG
TCGATCAACG TCTTGCCCAG CCTCACCATC AACTGGTTGA TCCCGAGACT CGAGGAGTTT
AAGGCCCGCC ACCCCCACCT CTATGTGGAT CTCTCCATCG GCGACTTTCA GGTGGATTTC
AAGCGAGATA AGTATGATGT GGCTATTCGC AGCGCCACGG TGCGCCCGAC CCATTGCCAT
GTACTCAAGT TGATGGATGA AGATCTCTGC CTGGTCTGCG CGCCGCAGCT GGCCAAGCAG
ATAGACAGCC TTCAAGATAT CAACCGCCAG ACGCTGCTGA AACACACCAC CCGCCCCGAG
CTCTGGCCAC TGTGGGCCGA GAAGGTGGGA CTCAAGCTGA CCACAGACAA GATGCTTGGG
ATGGAGCATT TCTATATGCT AAGTCAGGCG GCGGTCAGCG GCATGGGACT GGCGTTGATC
CCCCGCTTCT TCATCGAAAA GGAGCTGGCA GAGGACAGCC TGGTGATCCC CTTAGCGACC
CAATTTACCA GCCCCTACGC CTACTATGTG TTGACGCCGA ATCTACCGCC GTCAAAGCAA
AGTGAGCGAC CACTCAAGGT CCAGGCCTTT ATCGACTGGC TGCTGGAGAT CTTTGCCCCA
TACCGCCACC AAAGCGACGA TCTAAGCTAG
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| Protein sequence | MKMNQLILPP LNALRAFESA ARHLSFTRAG NELFVTHGAI SKQIKTLESY LDVSLFNRQH
KQLSLTPEGE RYLRHISSAL QSISQATEEL RSQPGIAQAL SINVLPSLTI NWLIPRLEEF
KARHPHLYVD LSIGDFQVDF KRDKYDVAIR SATVRPTHCH VLKLMDEDLC LVCAPQLAKQ
IDSLQDINRQ TLLKHTTRPE LWPLWAEKVG LKLTTDKMLG MEHFYMLSQA AVSGMGLALI
PRFFIEKELA EDSLVIPLAT QFTSPYAYYV LTPNLPPSKQ SERPLKVQAF IDWLLEIFAP
YRHQSDDLS
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