Gene Shew_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2462 
Symbol 
ID4921507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2896062 
End bp2897870 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content56% 
IMG OID640164052 
ProductMORN repeat-containing protein 
Protein accessionYP_001094587 
Protein GI127513390 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000572585 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAGCGTA TCTTACTGTT TCTGCTTGTC TTGTGTGTAA GTTTGAGAGC CGCCGAGGCG 
AGCATCTGGC TCGATAAGGA CTGGCAACCG ACCGAACTAA AGAGCGAGGC CAAGTTTTAT
CTCAAGAAAC CGCTCGAGCC TCTGCCCGGC CTATCCTTGG GGCGGTTTCG CTTCGAGCCC
TATTATCTCG GCACCGAGAC TAAGCAATTT AGTGGTGCCC TAAGCAGTGA TCGACTGGGA
GATAAGGGCA CTCATCCCGT GGGGCCTTAT CGCTTCTTCG CCAGCGATGG CACCCTGGTC
GAGCAGGGCG AATTTAATGA CCAGGGTCAG CGCCAAGGCC TGGTGAGGAT TTATGCTGAG
CAGGGAAAAC TCAGCTGCGA CTGCCTCTTT GATATGGGCG AGAGAGAAGG CACGCAGAAA
GAGTATTACC CAACAGGCGA GCTTAAGCGC GAGTCTGTCT ATCACCTGGG CAAGCCTGTG
CAGCAGGAGA TGGTCTATAC ACAGACCGGG GCGCTGGTAC GTATCCTATG TCATACCGGG
CAATGCAGTG ACCGCTTCTA CAACCCACTG GGGCAGCTGA CCATGGAAAG CCAGAAACGA
GATGGGCGCA AGCATGGCAC CGAAACCTTC TGGCAGGATG GCAAGGTGGA GGTGACCCAG
GCCTATCGTG ATGGCAAGGA GGAGGGCGAC TACTTTGCCT ATTTTCAAAG TGGTCAGCTC
AAGCAGCATC ACAGATGGAA AAATGGCATC AAGACGGGCG AGCAGCTGAA CTATTTCGAA
GATGGTCGCC TGGCCAAACG CGAGCTCCTC GATGAGCGTG GGCGCACCGA GAGCTTGGTC
GAGTATCGTG ACGATGGCGA GCGCTACCTC GAGGTGGAAT ATCGCTACCT CGTCGATGGC
GACCGCCAAG AGGTGAGGCG CTTCTATCAA AAAGAGGTCT TGGTCAAGCA GATAGAGCAG
CACAAGCAGA GGCAGTGGCG TCTGGTCAGC CAATATCTTG AGGGCGAGAT GATAGGCCGC
GAGGAGACTA TAGCGGGTAA GCTCACCGGA TTAAAAGTTG AGGCCAAGCT TGGCGGTAAC
AATAAGTTCA GCGGTAACGA CAGTCTTGGC GCAAGCAATA GTCACGCAGC TAACAATAGC
GACGCTGCCA GCAATAAACA GGGCCGGAAC AATCAAGTCG CCTGGATAGA GAAGAGCCAC
TATCACGACG GCGTGAAGCA GGGAAAGGCA GAGAAACGAA GCGGCGATGG CAGGCTCATC
AATCAGGGAG AATATGCCGC CGACAAGCAG GTGGGTGATT GGGTGATGCA AAGCCGCGAG
ATGCGTACCC AATGCCACTA TAACCGCCAT GGTCGGCTCG ATGGCGAGTA TTTATCCCTG
GGAGAGGCGG GTCAGGTGTT GGAGCGAATC CATTATCGCG ATGGCGAGCT CACAGGTAAA
TTTGAGCGCT ACTATAGCGA CGGCGAGATC TACGCCCTAG GGCAATATCT TAACGGTCAG
CGTGACGGCG ATTGGATAGT GCCGCCGAGC GAGGGGGATT ATTCGCCGCG CCCCGTGACT
CGACGCGAGT ATTGGCAAGG CCGATATCGG GCAGGCAAGC AGGTGGGGAA ATGGCAGCGT
TTCAGCGCCC AGGGCTATAG GCTGGCTATC GCGAAGTTTG ATGAGCAGGG GCGCCTACAT
GGCACTCAGT ATGCGTTTTA TGATGATGGC GCCCTGAGTA GGCGCAGCGA GTATCGCCAC
GGCGAGCCGA CCGTGGCTGA ACAAAGCTGG CCCTATCGCA CTCAGCATGA GCTGATCTTT
CGGCGATAG
 
Protein sequence
MQRILLFLLV LCVSLRAAEA SIWLDKDWQP TELKSEAKFY LKKPLEPLPG LSLGRFRFEP 
YYLGTETKQF SGALSSDRLG DKGTHPVGPY RFFASDGTLV EQGEFNDQGQ RQGLVRIYAE
QGKLSCDCLF DMGEREGTQK EYYPTGELKR ESVYHLGKPV QQEMVYTQTG ALVRILCHTG
QCSDRFYNPL GQLTMESQKR DGRKHGTETF WQDGKVEVTQ AYRDGKEEGD YFAYFQSGQL
KQHHRWKNGI KTGEQLNYFE DGRLAKRELL DERGRTESLV EYRDDGERYL EVEYRYLVDG
DRQEVRRFYQ KEVLVKQIEQ HKQRQWRLVS QYLEGEMIGR EETIAGKLTG LKVEAKLGGN
NKFSGNDSLG ASNSHAANNS DAASNKQGRN NQVAWIEKSH YHDGVKQGKA EKRSGDGRLI
NQGEYAADKQ VGDWVMQSRE MRTQCHYNRH GRLDGEYLSL GEAGQVLERI HYRDGELTGK
FERYYSDGEI YALGQYLNGQ RDGDWIVPPS EGDYSPRPVT RREYWQGRYR AGKQVGKWQR
FSAQGYRLAI AKFDEQGRLH GTQYAFYDDG ALSRRSEYRH GEPTVAEQSW PYRTQHELIF
RR