Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2444 |
Symbol | |
ID | 4921600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2874607 |
End bp | 2874987 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164034 |
Product | hypothetical protein |
Protein accession | YP_001094569 |
Protein GI | 127513372 |
COG category | [S] Function unknown |
COG ID | [COG4628] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.035682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000018391 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGGCCAAA TTTTTTACTC AGCGATCACC ATGACTCAGG CGAATAACCC ACTACACGGC ATCAAACTCG AAGCCCTACT CACAGACCTC GTCGACCACT ACGGCTGGGA AGAGCTTGGC AGACGCATCG ACATACGCTG CTTTAACCAC GACCCATCCA TAAAATCCAG CCTCAAGTTC TTGCGTAAGA CGCAATGGGC CAGGGAAAAG GTGGAGCGCC TCTACCTCAA GATGATTGGC GAGCCTATCC CGGCGCACCT ACGCGGCGAT GCCGGTCGTC CTATAGATGC CCCCAAGCCT AAACGCACCA CTGGCGATGA GGCGGAAAGC TCAGGCACCA GCGGCGTCAA CCAACATATT TGGGGTAAAA CTGACGACTA A
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Protein sequence | MGQIFYSAIT MTQANNPLHG IKLEALLTDL VDHYGWEELG RRIDIRCFNH DPSIKSSLKF LRKTQWAREK VERLYLKMIG EPIPAHLRGD AGRPIDAPKP KRTTGDEAES SGTSGVNQHI WGKTDD
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