| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2440 |
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| Symbol | |
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| ID | 4921596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2867592 |
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| End bp | 2870846 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164030 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001094565 |
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| Protein GI | 127513368 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0608966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000826173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAGC AAGATCGACA CCAAGATAAT CAGCAGAGCC CAAAACGTCT GGGATTTTCC
GGACGCCTGG CGGCCATGTT CCAGCTGAGC GCCATCACCC CCTTGCTGGC CCTGCTTGGC
CTGCTACTGG GTCTGTTCGC CGTCATGGTG ACCCCAAAAG AGGAAGAGCC GCAGATAGAT
GTCACCTTTG CCGACATCTA CATCCCCTTC CCCGGCGCCA CGCCGAGCGA GGTCGAGCAT
CTGGTCACCC AGCCTATGGA GGAGGTGATC TCGCAGATCA AGGGGATAGA CACCCTCTAC
TCCTTCTCAC AACCAGACGG CGCACTGATC ATCGCCATCT TCGAGGTGGG GATCCCGCGT
AACGAGGCGA TCGTCAAGCT CTACAATCAG GTCTATTCCA ACAAGGACAA GGTTGCCAGC
CAGGCAGGCG TGGGCGAGCC ACAGATCAAG CCCCGCGGCA TCGACGATGT GCCCATCGTC
AGCCTGACCC TATGGTCGAA AGACAAGGCG CAATCTGCCG AGCAGCTGAC CCATATCGCC
AAGGGACTGG AGAGCGAGCT GAAACGCATT CCGGGCACCC GCGAGATCTA CAGCGTCGGT
AGTCATGAGA TCAGCCTCAA CGTGCGGATC GATCCCGCCA AGATGAGCTT CTATGGCCTC
ACCTACGACG ATATCAACCG TAGCCTGTCG AGCAATAACC ATGTCTCCAT GCCAGTATCT
CTGGTGCAGG ATAATCAGGA GATCAAGGTA CAAACTGGAC AGTTTTTAAA ATCGAAACAA
GAGGTTGAGC AGCTGGTTGT CGCCGTGTAT CAGGACGAGT CGGGCCAGAG CGCCCCCGTG
TACCTTGGCG ATATCGCCAA GATTAGCCTC AACAGCGACA TCCCGACCCA GCACGCCTGG
CACGGCGATA AGTCGGCCAT CTATCCTGCG GTCACCATCG CCATCGGCAA GCAGCCCGGC
GAGAACGCCG TGGATATCGC CAATGTGATC CTCGAGCGCC TGGACAAGAT AGACAACATA
CTGGTTCCCG ACGATGTGAA CATCACGGTC TCGCGCAACT ATGGTAAGAC GGCGGGCGAC
AAGGCCAACA CCCTGATCCT CAAGCTGGTG TTTGCCACCT CGGCCGTGGT GATCTTGGTC
TTCCTCACCA TGGGGCTACG CGAATCTGTA GTAGTGGGCA TCGCCATCAT CATCACCCTG
GCGATCACCC TGTTTGCCTC CTGGGCCTGG GGCTTTACCC TTAACCGTAT CTCGTTGTTC
GCCTTGATCT TCTCTATCGG CATACTCGTA GATGACGCCA TCGTGGTGGT GGAGAACATC
CACAGGCATA TGGCGCTGGG CAAACGCTCC TTCGTGGAGC TGATCCCCGT CGCCGTAGAT
GAGGTGGGCG GCCCGACAAT ATTGGCGACC TTTACCGTGA TCGCCGCGCT GATGCCCATG
GCCTTCGTAT CCGGCCTCAT GGGCCCCTAC ATGAGCCCGA TCCCCATCAA TGCCAGCATG
GGGATGCTGA TCTCTCTGGC CATCGCCTTC ATCGTCACCC CTTGGCTGGC CACTAAGCTG
CTCAAGGGTC ATCAACACCA AGGTGGTGAT GGCGAGCATG ATGTGGACGA TCGCATGCTG
AGGCTGTTTA CTAGGCTGAT CTCCCCCTTC GTCAGAGGCA AACAAGCCGG TAAGGCGAGG
ATTGGCCTGG GCGCCGCCAT CGCCCTGCTG ATCATGATCG CCGTGTCCCT GCCCGTGGGT
CAGTTGGTGG TGCTCAAGAT GCTGCCCTTC GACAACAAGT CGGAGTTTCA GGTGATGCTG
GATATGCCAG AAGGCACGCC GGTTGAACAG ACCCAGCGCG TACTCAAGGC CCTGGCCATG
GAGCTGGATA AGGTCGAAGA GGTAGACAAC TACCAGCTCT ACGCCGGCAC CGCCGCGCCG
ATGAACTTTA ACGGCCTGGT GCGTCACTAC TTCCTCAGAC AGAGTCAGGA GCTGGGCGAT
ATTCAGGTTA ACCTGGTTGA TAAAGGCGAT CGCGACAGAG ACAGTCACAG CATAGCTTCC
GAGGTGCGCC GCGCGCTGCA GGCCACCGCC AAGCAATACC ATGCCAACGT CAAGGTGGTC
GAAGTGCCCC CAGGCCCACC CGTGTGGTCG CCCATCCTGG CCGAGGTCTA TGGCCCTAAC
GCCGAGATGC GTGAGACAGC AGCCAATGCA CTGCAGCAGC TGTTCCACGA TACTCAGGAT
GTGGTGGATA TCGACATCTA CCTGCCGGCC GCGCAGCAGA AATGGCAGGT TAATATCGAC
CGCGCCAAGG CCAGCCTGAT GGGCGTGCCC TACAGCAATA TCGTCGATCT GGTGGCCACC
TCGGTGGGCG GCAAGGCGGT GAGCTACCTG CATAAGCCGA ATCAAAAGTC GCCTGTGCCT
ATCAAGCTTC AGCTGGAGGA AGGCGCCAAG GTGGATCTCG AGCAGGTGCT TAACCTCAGG
CTCACCAATG CCTCGGGTAA CTCTGTGCCC GTCTCTGAGC TGATCACCAT ACACAAGCGA
GCCATAGACG CGCCTATCAT ACGCAAGAAC ATGATCCCTA TGATCATGGT GGTCGCCGAC
ATGGCGGGCC CGCTGGACAG CCCACTCTAT GGCATGTTCG AGATCGCCGG CAGTATCAAT
CAAGAGGGTG GTCTGGGCTT CGATCAACAC TATGTCAACC AACCCTCAGG GCTGGACAGC
ATCGCCGTGC TCTGGGACGG CGAGTGGAAG ATCACCTATG AGACCTTCAG AGACATGGGT
ATCGCCTATG GCGTGGGCAT GATCGCCATC TACCTCCTGG TAGTGGGTCA GTTCCGCTCC
TACAGCGTGC CGCTGATCAT CATGGCGCCT ATTCCGCTCA CCATCATAGG GGTGATGCCG
GGCCATGCCC TGCTGGGGGC GCAATTTACC GCCACCTCTA TGATAGGCAT GATCGCCCTG
GCGGGCATTA TCGTGCGTAA CTCCATCCTC TTGGTGGACT TTATTAATCA GGAAACCGCC
GCGGGTGTGC CCTTCGAGCA GGCGGTGATC CATTCTGGCG CCGTCAGGGC CAAGCCCATC
ATGTTGACGG GACTGGCGGC CATGATAGGT GCCCTGTTCA TCTTAGATGA TCCGATCTTC
AACGGCCTGG CCATCAGCCT GATCTTCGGC ATCTTGGTAT CAACCCTGTT AACCCTGGTG
GTGATCCCCG TGCTCTATTA CGCCGTGATG CGTCACCGCC CCGAATATTT TGCCGCGGTT
AATCCGCAAT CTTAA
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| Protein sequence | MNQQDRHQDN QQSPKRLGFS GRLAAMFQLS AITPLLALLG LLLGLFAVMV TPKEEEPQID
VTFADIYIPF PGATPSEVEH LVTQPMEEVI SQIKGIDTLY SFSQPDGALI IAIFEVGIPR
NEAIVKLYNQ VYSNKDKVAS QAGVGEPQIK PRGIDDVPIV SLTLWSKDKA QSAEQLTHIA
KGLESELKRI PGTREIYSVG SHEISLNVRI DPAKMSFYGL TYDDINRSLS SNNHVSMPVS
LVQDNQEIKV QTGQFLKSKQ EVEQLVVAVY QDESGQSAPV YLGDIAKISL NSDIPTQHAW
HGDKSAIYPA VTIAIGKQPG ENAVDIANVI LERLDKIDNI LVPDDVNITV SRNYGKTAGD
KANTLILKLV FATSAVVILV FLTMGLRESV VVGIAIIITL AITLFASWAW GFTLNRISLF
ALIFSIGILV DDAIVVVENI HRHMALGKRS FVELIPVAVD EVGGPTILAT FTVIAALMPM
AFVSGLMGPY MSPIPINASM GMLISLAIAF IVTPWLATKL LKGHQHQGGD GEHDVDDRML
RLFTRLISPF VRGKQAGKAR IGLGAAIALL IMIAVSLPVG QLVVLKMLPF DNKSEFQVML
DMPEGTPVEQ TQRVLKALAM ELDKVEEVDN YQLYAGTAAP MNFNGLVRHY FLRQSQELGD
IQVNLVDKGD RDRDSHSIAS EVRRALQATA KQYHANVKVV EVPPGPPVWS PILAEVYGPN
AEMRETAANA LQQLFHDTQD VVDIDIYLPA AQQKWQVNID RAKASLMGVP YSNIVDLVAT
SVGGKAVSYL HKPNQKSPVP IKLQLEEGAK VDLEQVLNLR LTNASGNSVP VSELITIHKR
AIDAPIIRKN MIPMIMVVAD MAGPLDSPLY GMFEIAGSIN QEGGLGFDQH YVNQPSGLDS
IAVLWDGEWK ITYETFRDMG IAYGVGMIAI YLLVVGQFRS YSVPLIIMAP IPLTIIGVMP
GHALLGAQFT ATSMIGMIAL AGIIVRNSIL LVDFINQETA AGVPFEQAVI HSGAVRAKPI
MLTGLAAMIG ALFILDDPIF NGLAISLIFG ILVSTLLTLV VIPVLYYAVM RHRPEYFAAV
NPQS
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