Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2429 |
Symbol | |
ID | 4921650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2855059 |
End bp | 2855553 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164019 |
Product | hypothetical protein |
Protein accession | YP_001094554 |
Protein GI | 127513357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0298623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGG CAAGTCAACC TGCGCTCGCC AATCTGCAGG ATATCATCAC CCCGGCCCCA GTCGGAATCT GGCCCCTCGC CTATGGTTAT TACCTGCTGG CGCTACTAGT GCTTATGCTG ATAGCTGCCC TGTTCATCTA TATTAAACGC AGAGGCAAGC TGCTGGCGGC CAAACGCGAG GCGCTTACTC TTCTCTCTAA GGTGACGTCA GAGGCCCCTC AACTACCGCT GGCGGTCAAC AGCCTGCTAA AACGCAGCGC CATGAGTTAT CTGCCCCGGG AGCAGGTCGC CTCACTACAG GGCGATGCCT GGTATGCCTG GCTAAGGGCC CAAGTGCCGA GCATGGATCC TATGCTGCCA AGCCTGTTGG AGAAGCGTTT CCAAGCTGGC AAGCTCTCAC CAAGTGAGGC CACGCAACTC CTCGATGGCG CCAAAGCCTG GCTACAGCAG GCGCTGCCAC TCAAGGCTGG CAAGGAGGCG TCATGTTCAC ACTAG
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Protein sequence | MQAASQPALA NLQDIITPAP VGIWPLAYGY YLLALLVLML IAALFIYIKR RGKLLAAKRE ALTLLSKVTS EAPQLPLAVN SLLKRSAMSY LPREQVASLQ GDAWYAWLRA QVPSMDPMLP SLLEKRFQAG KLSPSEATQL LDGAKAWLQQ ALPLKAGKEA SCSH
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