| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2428 |
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| Symbol | |
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| ID | 4921649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2854129 |
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| End bp | 2855058 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164018 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094553 |
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| Protein GI | 127513356 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0340562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA ATGCTTTACC CCTATTTGCC GATGGCGTCT CCCTCAATCA GAAAGAGCTG
TTAGCCTGCC AAAATCTTGC CCGGGCCCTG CCCGAGCGCA AGAGCAAGGC GCGCGCGGCA
CTAGCCGGCC ACAGAGCCAG CAGCATCAAG GGACGGGGAA TGGAGTTTGC CGAGGTTCGC
CATTACCAAG CCGGCGATGA TGTGCGCACC ATAGACTGGC GAGTGACTGC CCGCACCGGC
AAGGCCCATA CCAAGCTTTT TGTCGAGGAG CGTGAGCGCC CGGTATTACT GCTATTGGAT
CTCAGCCACA GCCTCTATTT CGGCTCGAGT CTAATGCTAC AATCGGTGCA GGCGGCGCAT
CTGGCAGCCA CCCTGGGCTG GGCCGCCGTC GGTCACGGCG ATCGCCTAGG CGCACTGATC
GCCAGCGAGG CCGAGCATCT CGAGCTTAAA CCCCGCAGCC GACAAACCGG CATGCTGGCA
CTCATCTCTG CCATAGAGCA GATCCACCAG CAGCAACTTC ATCAGCTAAA TCAGCCGGTG
AAACAGCCCG AGCACATCTT CAAGGCCTGT CAGCGCCTGA GGCGAATCGC CAAGCCTGGC
TCGCTAATCT GGATCATCAG CGATGGCAGC CATTTCGGCC CCCAGTGTCT GGGACCACTG
AGCGAGCTTA AACGCCACTG CGATATCGGC GCCTTTCTGA TCACTGACCC CCTCAGGCAA
GGCACCCTTA AGCTGCCGCC CCAGTTTCAA TTTCCGGTGA GGGATGGCGA TAAGGAGCTG
ATGTTAGACA GACGCAGCTA CGATGCCTGG CTGGCTCAGC AACAAACACA GCAACAGGGA
TTTATCACCA TGATGAATCA GATCAACGCG CGGCCAAGAC GCATCGACGC GGCCCAGCCG
TTAGACCAAC AAATTGGAGC CCTGAGGTAG
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| Protein sequence | MGQNALPLFA DGVSLNQKEL LACQNLARAL PERKSKARAA LAGHRASSIK GRGMEFAEVR
HYQAGDDVRT IDWRVTARTG KAHTKLFVEE RERPVLLLLD LSHSLYFGSS LMLQSVQAAH
LAATLGWAAV GHGDRLGALI ASEAEHLELK PRSRQTGMLA LISAIEQIHQ QQLHQLNQPV
KQPEHIFKAC QRLRRIAKPG SLIWIISDGS HFGPQCLGPL SELKRHCDIG AFLITDPLRQ
GTLKLPPQFQ FPVRDGDKEL MLDRRSYDAW LAQQQTQQQG FITMMNQINA RPRRIDAAQP
LDQQIGALR
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