| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2426 |
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| Symbol | fadI |
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| ID | 4921647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2851454 |
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| End bp | 2852764 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164016 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001094551 |
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| Protein GI | 127513354 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0353439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAT TACAGCAAGT AAGGAACGCA AAGGGCGATC GCATCGCGAT AGTGATGGGG
CTTAGAACCC CCTTTGCGAA GCAGGCTACC GCGTTTCATG GGGTGTCGGC ATTGGATATG
GGCAAGATGG TGGTGAACGA ACTCCTGTCT CGCTCGGAAC TCGACCCGAA AGAGATTGAA
CAGCTCGTTT ATGGTCAGGT AGTACAGATG CCAGCGGCGC CCAACATCGC CCGCGAGATA
GTCCTGGGTA CTGGCATGAA TGTGTCCACC GATGCCTATA GCGTGACACG TGCCTGCGCT
ACTAGTTTCC AGTCGACAGT CAATGTGGCC GAGTCCATCA TGACGGGTAA TATAGAGATA
GGGATTGCCG GCGGCGCCGA TTCATCATCT GTATTGCCAA TCGGCGTGTC GAAGAAGCTG
GCTCACGCCC TGGTGGATCT CAATAAGGCG CGCAGCTTTG GTCAGAAATG GGCCATCATT
CGCCGTCTTG GACTGAAAGA TCTGCTCCCT GTGCCCCCTG CGGTTGCGGA ATACTCGACT
GGCCTTTCTA TGGGACAGAC CGCCGAGCAG ATGGCCAAGA CCTATAACAT TAGCCGCGCC
GATCAAGATG CCCTGGCGCA TCGCTCACAT ACCCTGGCGA CAGAAACCTG GGATTCGGGC
CACCTGCGTG ATGAGGTGAT GGTGGCGCAC GTGCCGCCAT ACAAATCATT CATCGACAGA
GATAACAACA TTCGCGAAAA CTCTTCGCTC GACTCTTACG CCAAGCTGCG TCCAGCCTTC
GACCGTAAAC ACGGCTCCGT GACGGCGGCC AACAGTACGC CACTGACCGA TGGCGCCTCG
GCGGTCCTCC TGATGAGCGA GAGCCGTGCC AAGGCCCTGG GTTATGAGCC GATTGGTTAC
ATTAAGAGTT ACGCCTTTAG CGCTATCGAC GTGTGGCAGG ATATGTTGAT GGGCCCTTCC
TATGCGACGC CGTTGGCGCT TAAGCGTGCC GGCATGGAGC TTGAGGATCT TACCCTTATC
GAGATGCATG AAGCCTTTGC GGCGCAGACC CTGGCCAACA TGCAGATGTT TGCCTCGAAG
AAGTTTGCCA AGGAGAAACT GGGTCGCGAC CGCGCCATAG GTGAGATCGA CATGACTAAG
TTCAACGTCT TAGGCGGCTC CTTGGCCTAT GGTCACCCCT TTGCGGCGAC CGGGACGCGT
TTGATCACTC AGGTGTGTCG CGAGCTGAAA CGCCGTGGCG GCGGTACCGG CCTGGCAACG
GCCTGTGCAG CGGGTGGTTT AGGTGCAGCT ATGATAGTAG AAGTGGAGTG A
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| Protein sequence | MSELQQVRNA KGDRIAIVMG LRTPFAKQAT AFHGVSALDM GKMVVNELLS RSELDPKEIE
QLVYGQVVQM PAAPNIAREI VLGTGMNVST DAYSVTRACA TSFQSTVNVA ESIMTGNIEI
GIAGGADSSS VLPIGVSKKL AHALVDLNKA RSFGQKWAII RRLGLKDLLP VPPAVAEYST
GLSMGQTAEQ MAKTYNISRA DQDALAHRSH TLATETWDSG HLRDEVMVAH VPPYKSFIDR
DNNIRENSSL DSYAKLRPAF DRKHGSVTAA NSTPLTDGAS AVLLMSESRA KALGYEPIGY
IKSYAFSAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFASK
KFAKEKLGRD RAIGEIDMTK FNVLGGSLAY GHPFAATGTR LITQVCRELK RRGGGTGLAT
ACAAGGLGAA MIVEVE
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