| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2419 |
|---|
| Symbol | |
|---|
| ID | 4921749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2839398 |
|---|
| End bp | 2839868 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640164009 |
|---|
| Product | phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_001094544 |
|---|
| Protein GI | 127513347 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.758987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAT ATTTGATGCG ACATGGCGAG GCGGGTTATC ACGCCCACTC AGATCGAGAA
CGAGTACTGA CAGAAATCGG CCGTTATCAG ACTGAATTGA TGAGTAATTG GTTGGCCCGT
GATGTGACCG AGTTCGATCT CGTGTTGGTG AGTCCCTATC TGCGTGCGCA GCAAACATGG
CAGGAAGTGA GTAAGCACTT TCCCGAACCG AGAAAGTGGC TGGTATTAGA CGAGCTGACT
CCATCGGCCG AGCCGGGCCT GGCGGCCGAT CTGACCCTGG CCTATGCAGA ACAGTATAAG
GCAGACAGTG TGTTAGTGAT TGCCCACATG CCGCTGCTAG GTTATATGGT GAGCGAGTTG
GTGCCAGGCA TAGAGCCGCC GCTGTTTGCG ACCTCAGGAG TGACCCTTAT TGATCGTCAT
GGTGAGCGTG GTTCGCTCAG CTGGCAGCAC ACACCTCATA CGGTGAGCTA A
|
|---|
| Protein sequence | MKLYLMRHGE AGYHAHSDRE RVLTEIGRYQ TELMSNWLAR DVTEFDLVLV SPYLRAQQTW
QEVSKHFPEP RKWLVLDELT PSAEPGLAAD LTLAYAEQYK ADSVLVIAHM PLLGYMVSEL
VPGIEPPLFA TSGVTLIDRH GERGSLSWQH TPHTVS
|
|---|
| |