| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2416 |
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| Symbol | |
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| ID | 4921746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2836447 |
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| End bp | 2837541 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164006 |
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| Product | chorismate synthase |
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| Protein accession | YP_001094541 |
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| Protein GI | 127513344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTA ACAGTATCGG TCAAAATTTT GTGGTGACGA CTTTTGGTGA GAGCCATGGT
AAAGCCTTAG GTTGTATTAT CGATGGCTGC CCTCCGGGTC TGGCGATCGA TGAAGCCGAT
ATGCAGCATG ATCTCGACAG GCGCCGTCCG GGCACTTCGC GTTATACCAC AGCCAGACGT
GAGCCGGATC AGGTGAAGAT CCTCTCGGGG GTGTTCGAGG GGCAGACCAC TGGTACTTCC
ATCGGCTTAG TGATCGAGAA TACCGATCAA CGTAGCCAGG ATTACTCCAA TATCAAAGAT
CAGTTCCGTC CAGGTCACGC CGACTACACT TATCAGCAAA AGTATGGCCT GCGAGATTAT
CGCGGTGGCG GGCGCTCATC GGCGCGGGAA ACCGCCATGC GTGTAGCGGC CGGCGCTGTG
GCCAAGAAGT ATCTAAAACA GGTGCACGGC ATAGAGATCA AGGGTTATCT GTCGCAGCTT
GGGCCTATCT GCGCCGAGAT ACTGGATTTT GATCAGGTTG AGCACAATGC CTTCTTCTTT
CCCGATGCTG CCAAGCTCGA GCAACTCGAC GAGTATATGC GTGAGCTGAA AAAGAGCGGT
GACTCCATAG GCGCTAAGGT GTCTGTGGTG GCGACTAATG TGCCTGTGGG ACTGGGCGAG
CCGGTGTTCG ACCGTCTCGA TGCCGATATC GCTCACGCCC TGATGGGGAT CAATGCCGTT
AAAGGGGTGG AGATTGGCGA TGGCTTTGCC GTGGTAAACC AGAAGGGCTC AGAGCACAGA
GATCTGATGT CGCCCGAGGG GTTCGCCTCT AACCATGCGG GCGGTATTCT CGGCGGGATC
TCGTCGGGTC AGCCAATCGT CGCGCATATC GCCATGAAGC CGACTTCCAG CATCAGCGTG
CCGGGAGAGA GTATGACGGT GCAGGGTGAG CGCGCCGAGG TGGTCACTAA GGGACGTCAC
GACCCCTGCG TAGGCATTCG CGCCGTGCCG ATTGCCGAGG CCATGTTGGC CATCGTCTTG
ATGGATCATC TTCTCAGACA CAGGGCACAA AACATGAATG TTGAGAGCAT CACCCCAGTG
ATTGGGATGA AGTAA
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| Protein sequence | MSGNSIGQNF VVTTFGESHG KALGCIIDGC PPGLAIDEAD MQHDLDRRRP GTSRYTTARR
EPDQVKILSG VFEGQTTGTS IGLVIENTDQ RSQDYSNIKD QFRPGHADYT YQQKYGLRDY
RGGGRSSARE TAMRVAAGAV AKKYLKQVHG IEIKGYLSQL GPICAEILDF DQVEHNAFFF
PDAAKLEQLD EYMRELKKSG DSIGAKVSVV ATNVPVGLGE PVFDRLDADI AHALMGINAV
KGVEIGDGFA VVNQKGSEHR DLMSPEGFAS NHAGGILGGI SSGQPIVAHI AMKPTSSISV
PGESMTVQGE RAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NMNVESITPV
IGMK
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