| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2408 |
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| Symbol | |
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| ID | 4921738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2825905 |
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| End bp | 2828391 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163998 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094533 |
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| Protein GI | 127513336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0178589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TCTTTTTGGG TGTCGCAATT GCATCCGCAT TGGGAATGGC TGGTTGTAGC
GAAGATAGCG TCGATCAACT CGCAGAGAAG ACTGAGCCGC TAATCCCTCT TTCACACATG
GTATTCGATC CTGCTAACAG CAAGGTACCA TTACCCAACG ATCTACTCTT TAGCGGTACC
ACTGACGGTA CCCTGACTAT GCCGGGCGAA AAAGCCGACG GCTCAAGCGA TTACACCGAC
CCTCAGATGG CGCTGGGCGC ACTGGACGGT TGGTCTACCA CCTCTCCTAT CTCTATCACG
GTTGAACCTG CTACCGACCA TGACGGCACC ATGCTGACGC TGGCGGCGGC CTCTGTGGCA
CAGCCTGGCG CGGTGCGTAT GTTCGAAGCC ACTGTAGGTG GTCCGCTATC ATCGGATCCC
GAGTGTCAGT CTGCACCATC TGTGTCAGCC TGTAAGATAG GCAACGAGCT TCAGTTTGGC
GTCGACTTTG TCGCCAGCGC CTCGGGCAAC ACTATCGCTA TCGTACCGCT CAAGCCACTC
AAGGCGGGCC AATCTTATGT GTATGCCACC ACAGACCTGA TTCAAGACTC GGCTGGCCGT
CCTATTGCGC CGTCGACCAC CTATGCCACG CTGAAACTCG ATATCGAGAC CAAGCCGCTG
CAGACACCCG ATCAGCTGAT GCTGCAAACG CTGGTGAACA GTTATGAGAA GGGCATGGCT
GCCGCCCACG GCGTAGATAG CGCGACTATC AGCTATGCGG GCCTGTTTAC TACCCAGGCG
ATCAACGATG TCTATGAAAC GACTAAGTTA CTGATGCTGC AAGAGGGCAC ACCTTTTGCG
CCGTCTATCT CTGTGCCTCA GCCGCATCCG CTGGGGATCA CGGTTGCCCA GGCGGCTGGC
CTGACACCTG CCGATGGCGT GGCCTATGTG GTCTCTAGCC TGGCCGATGT TTATGTTGCC
GAACTGACCC TGCCTACTTA TGGCGCCTGT AACTCTGTGA TGTGTAATGG CATCAACGGC
AACTGGCATG CGCTGGGCGA CAGCCCTGTA GCCGTATTGC TAGCCCTGCA ATCGGGTACC
CTGAGTCAGC AAAATTACGG CGCTCAGGCC GTGGCGCACG GTATCGACCC CGCAGCGGGT
CTGGCCGATC CTGCCCTGTT GGCGGGTAAG GCATGGCTAC TCGATGATGG CACGCCGGCC
GATAAGGCCA AGCACCTGAC TAAGTTCAAC CCTATCCCTG CACCAACCGG TGCAGAGAAG
GTTCCAGTGT TGATCTCTAT GCCAAACGCC GAGCGTCTGG CGCAGTTTTA CGCCTCTCAG
GGACTACCTT TTACGCCGCC AACTGGTGGT TGGCCGACCA CCATCGCCAT GCATGGCCTA
GGCGGCGGTA AAGAGATGTC ACTGGCCTAT GCCGGTAGTT ATGCCGCCAT GGGCGTTGCC
ACTATCGCCA TCGATATGCC GCTGCACGGC GCTCGCTCAT TCGACGCCAA CGGTGACGGC
ATCTATGAGG TATCGGCTTC AGATCCAGCA TTTGGCGCTG TGATAGGTAA CCCAGATGCG
TTTAAGAATG GTAACCCCTT GGTGTTTGTT AACATAGCGA GCACTCTGGC GGTACGTGAT
AACTTCAGAC AGGCAACGGT TGACCATCTA GCGCTTCGCG CCGCCCTCAC AGGGCTTGCC
GGTGGCCTGG CCGCCGCGCA GATGCCGCAG ATGTTCGATA TCACCAAGAT CAGCGCACAG
GGCCTAAGTC TTGGTGCCAT CGTTGGTACC GACTTTGCTA CCTATGCTAA CTCTGGCCTG
AGCCATCCGG CTAACGGTGC GGACCTTAGC TATGTGCATA AGCTCAATGC GGTTTCTCTG
GTTGCGCCAA CTGGTGGCTT ATCGGGCACC TTCATCGGCT CTGCCACCTT CGGCCCGCTG
CTGTTTGAAA ACGTAACCGC CAGCGATACC TTCAAGGCAT TGGTGGATGA GGCTAACGTT
GCCGGTTATG AGCCTGGTAC GCCAGAGTAT GCGGCCCTGG TTCAGGCAGT GTACGCCGAG
TTCATTCCAA CCTTCGCCTT CGCGGTGCAA ACTGCGGTAG ATGGTGCGGA TCCTATCAAC
CATGCAGCGA CGCTTAAATC GACTGGCCTG CCTGTACATC TGATTGAAGT CGTGGGGGAT
GGCAGCAACC TAGGGGATCA GGTGCTACCG AATCGCGTTG ACAAGTTCCC TGTGGCGGGT
ACCGAGCCGC TGATTGCCAA CCTGGGTCTT GAATGTATTG ATACTACAAC TGTTGGCTCT
GGCGCGGTGC GCTTTAGCAA AGGTCATCAC AGCTCGCTGA TTAGCCCAAG TGAGATCCCA
GGCGTGACAG ATGGTAGCGC CGCCGCGGCT ACGGTTGAGA TGCAGCAGCA AGTTGCCGCG
TTTGCCCTGA CTGCGGGTAA GGGCCAGGCA AGCGTACTGG TGCAGGATGA TTCAGTGATT
CAGCCTTGCG CGGTGCCAGC TAACTAA
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| Protein sequence | MKRLFLGVAI ASALGMAGCS EDSVDQLAEK TEPLIPLSHM VFDPANSKVP LPNDLLFSGT
TDGTLTMPGE KADGSSDYTD PQMALGALDG WSTTSPISIT VEPATDHDGT MLTLAAASVA
QPGAVRMFEA TVGGPLSSDP ECQSAPSVSA CKIGNELQFG VDFVASASGN TIAIVPLKPL
KAGQSYVYAT TDLIQDSAGR PIAPSTTYAT LKLDIETKPL QTPDQLMLQT LVNSYEKGMA
AAHGVDSATI SYAGLFTTQA INDVYETTKL LMLQEGTPFA PSISVPQPHP LGITVAQAAG
LTPADGVAYV VSSLADVYVA ELTLPTYGAC NSVMCNGING NWHALGDSPV AVLLALQSGT
LSQQNYGAQA VAHGIDPAAG LADPALLAGK AWLLDDGTPA DKAKHLTKFN PIPAPTGAEK
VPVLISMPNA ERLAQFYASQ GLPFTPPTGG WPTTIAMHGL GGGKEMSLAY AGSYAAMGVA
TIAIDMPLHG ARSFDANGDG IYEVSASDPA FGAVIGNPDA FKNGNPLVFV NIASTLAVRD
NFRQATVDHL ALRAALTGLA GGLAAAQMPQ MFDITKISAQ GLSLGAIVGT DFATYANSGL
SHPANGADLS YVHKLNAVSL VAPTGGLSGT FIGSATFGPL LFENVTASDT FKALVDEANV
AGYEPGTPEY AALVQAVYAE FIPTFAFAVQ TAVDGADPIN HAATLKSTGL PVHLIEVVGD
GSNLGDQVLP NRVDKFPVAG TEPLIANLGL ECIDTTTVGS GAVRFSKGHH SSLISPSEIP
GVTDGSAAAA TVEMQQQVAA FALTAGKGQA SVLVQDDSVI QPCAVPAN
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