Gene Shew_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2403 
Symbol 
ID4921793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2818494 
End bp2819087 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content56% 
IMG OID640163993 
Productarylesterase 
Protein accessionYP_001094528 
Protein GI127513331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGCCG CTTGCCTGCT TGTCTTCTTC TTGATCCCCC AGGCCCATGC TAACCCGATA 
TTGATCTTAG GTGATAGCCT AAGCGCAAGC TACGGCATGG AACAAGACAA GGGCTGGGTG
CATCTATTGC AGCAACAATC CCCCGAGGTC ACCATCATCA ATGGCTCGGT GAGCGGTGAG
ACCTCGGCCG GCGGTCTGCG CCGACTGCCC GCCCTGCTTG ACTCGACCAA GGCCAAGCGG
GTCTTTATCG AGCTTGGCGG CAACGACGGT CTGCGCGGAT TTTCGCCTAA GCAATTGAAA
AATAATCTTA CAAAAATGAT ACTGCTCGCC AAGGACTCAG GCGCCGAGGT GCTGCTCAGT
GAGGTGATGG TGCCGCCCAA CTATGGCCCG CGTTACGCCA AACAATTTAC CCAGGTCTAT
CAGGAGCTAT CGAGCGAGCA AGGGGTCACC TTGGTGCCCT TCTTCATGAC AGAAATAGCC
ATTCATCCCG AGCTGATGCA GGCCGACGGC ATACACCCCA ACGAGCAGGC ACAGCCACAG
ATCGTCAGCT TTATCCGCCC CTGGCTTATC GATACGCAGC AACCGAGTGA ATAG
 
Protein sequence
MQAACLLVFF LIPQAHANPI LILGDSLSAS YGMEQDKGWV HLLQQQSPEV TIINGSVSGE 
TSAGGLRRLP ALLDSTKAKR VFIELGGNDG LRGFSPKQLK NNLTKMILLA KDSGAEVLLS
EVMVPPNYGP RYAKQFTQVY QELSSEQGVT LVPFFMTEIA IHPELMQADG IHPNEQAQPQ
IVSFIRPWLI DTQQPSE