| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2398 |
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| Symbol | |
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| ID | 4921788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2812498 |
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| End bp | 2813667 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163988 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094523 |
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| Protein GI | 127513326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.17382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.699282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAT TTGATAATCA GGGGGTCGCG TTTAAAGGCT TTGCCATCAT GGCGTTTATC
GTCGTGATTC TGGCAGGGAT AAAAGCCGCC AGCCCTATCG TGGTTCCCTT TGTGTTGTCG
GCCTTTATTG CGGTGATCTG CAACCCGGCA ATCAATGGCA TGACCCGCCT TAAGCTGCCC
CGCGCATTGG CGGTGGCCAT CATGATGGTA TTTATCGTGC TGATGGGGCT CTGGCTGGCC
TCCTTGGTGG GGAGCTCAAT CAACGAATTT TCCCGTCAGT TGCCCCTTTA TCGGGATCAG
CTGGTGGAGC AGTTTTCCTG GGTATTGACC AAGTTACAGG CGCTGAATAT CGAGGTCTCC
AAGGAGCAGA TCTTGGCCTA TTTCGACCCG GGTATTGCGC TGTCGATGAC CACCAACATG
TTGTCCAGTG TCGGCGGCGT GATGGCTAAC CTGTTTCTGA TCATTCTGAC CGTAGTGTTT
ATGTTGTTTG AGGCTCAGGA CTTGCCCAAG AAGCTGCATT TCGCGCTGGA CGATCCTGAC
ATGCGCATCA AGCAGATAGA CAAGTTCCTG CAGTCAGTTA ACCAATATAT GGTGATCAAG
ACGTTGGTGA GCGTGGGGAC CGGCGTGGTG GTCGGGACGG GCTTGGCGCT GATGGGCGTC
GATTACGCCT TGCTCTGGGC CGTTGTCGCC TTCCTGTTTA ACTATATTCC CAACATAGGC
TCTATCATCG CCGCGATTCC GCCTGTGCTG CTGGCCTTTA TTCAACTCGG CCCTGCGGGG
GCGGGGGGCA CGGCGCTGCT CTATCTGGCG ACCAATACCG TGATGGGGAA TATCGTCGAG
CCCAAATATA TGGGGCGCGG CCTGGGACTC TCGACCCTGG TGGTGTTCCT CTCCTTGATC
TTCTGGGGCT GGCTGCTGGG CTCTGTGGGC ATGTTGCTCT CTGTGCCGCT GACCATGATC
GTCAAGATAG CGCTAGAGTC GAGTCAGAGC GGTGGTTGGC TGGCCATCTT ACTGGCCGAT
CGCGTCGATG AGACCCTGGT TAACGCCGAT GCACAGGTTA ATGCCAAGGT ACAGGTTAAC
GCTGAGGTAC AGGTTAACGC CGATGCTCAG GTAAGTGGCA AGGCCAGCAA GCAAACCGAT
GCCGGCGAAC AAGCCGACGT GGAAAAGTAG
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| Protein sequence | MTRFDNQGVA FKGFAIMAFI VVILAGIKAA SPIVVPFVLS AFIAVICNPA INGMTRLKLP
RALAVAIMMV FIVLMGLWLA SLVGSSINEF SRQLPLYRDQ LVEQFSWVLT KLQALNIEVS
KEQILAYFDP GIALSMTTNM LSSVGGVMAN LFLIILTVVF MLFEAQDLPK KLHFALDDPD
MRIKQIDKFL QSVNQYMVIK TLVSVGTGVV VGTGLALMGV DYALLWAVVA FLFNYIPNIG
SIIAAIPPVL LAFIQLGPAG AGGTALLYLA TNTVMGNIVE PKYMGRGLGL STLVVFLSLI
FWGWLLGSVG MLLSVPLTMI VKIALESSQS GGWLAILLAD RVDETLVNAD AQVNAKVQVN
AEVQVNADAQ VSGKASKQTD AGEQADVEK
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