| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2390 |
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| Symbol | |
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| ID | 4921454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2802496 |
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| End bp | 2804778 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163980 |
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| Product | formate acetyltransferase |
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| Protein accession | YP_001094515 |
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| Protein GI | 127513318 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0262842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.15494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AAACTGAGCT GTTCACCAAA GCGTGGGAAG GTTTTACTCC TGGTGATTGG
AAGTCTGAAG TAAATGTACG CGACTTTATT CAAAAGAACT ACAAGCCCTA TGAAGGAGAC
GAATCTTTCC TAGCAGGCGC CACCGAAGCG ACCAGTGCGC TTTGGGACAA AGTGATGGAA
GGTATCAAAC AGGAAAACCG CACCCACGCG CCGGTTGATT TCGATACCGA CAAAGTCTCT
ACCATTACCT CTCATGCTGC AGGTTACATC GACCAAGATC TTGAAACCAT TGTCGGTCTA
CAAACAGACG CGCCACTTAA GCGTGCCATG TTACCCAATG GCGGTATCCG CATGGTCGAA
GGTTCATGCG CTGCCTATGG TCGTGAACTG GATCCAAACA TCAAATATGT CTACTCAGAG
CTGCGCAAGA CCCACAACCA AGGCGTGTTC GACATCTACA CCCCTGAGAT CATGCGCTGC
CGTAAGTCTG GCGTACTGAC AGGTCTGCCA GATGCTTACG GCCGTGGTCG TATCATTGGT
GACTACCGTC GTATCGCCCT GTACGGTATC GATTATCTGA TGCAGGAAAA ATTTGCCCAG
TTCAGCTCAC TGCAGGCGCA GTTTGAAGCG GGTGAAGATC TTTCAGCCAC CATGCAACTA
CGCGAAGAGA TCGCCGAGCA GCACAAAGCC CTGGGTCAGA TGAAGCAGAT GGCTGCCAGC
TACGGCTGTG ACATCTCAGG TCCTGCAACC AACGCTAAAG AAGCGATTCA GTGGACTTAC
TTCGGCTACC TGGCCGCAGT GAAGAGCCAA AACGGCGCCG CCATGTCTCT TGGCCGTACC
TCTAGCTTCC TGGATATCTA CATCGAGCGT GACATCAACA ATGGCGTGTT GACCGAACAA
CAAGCCCAGG AGATGGTTGA CCATTTCGTG ATGAAGCTAC GTATGGTGCG CTTCCTACGT
ACCCCTGAGT ACGACGAGCT ATTCTCTGGC GACCCAATCT GGGCTACCGA GTCTATCGCG
GGTATGGGTC TTGATGGCCG TACTCTGGTG ACTAAGTCTA GTTTCCGCTT CCTGCACACC
CTATACAACA TGGGTCCAAG CCCTGAGCCA AACATCACAG TGCTTTGGTC AGAGAAGCTA
CCACTTAACT TCAAGAAGTA CTGCGCTAAG GTCTCTATCG ATACCAGCTC TATTCAGTAC
GAAAACGATG ACCTGATGCG TCCAGATTTC GATTCTGACG ACTACGCCAT CGCCTGTTGT
GTGAGCCCTA TGGTTGTTGG TAAGCACATG CAGTTCTTCG GTGCCCGCGC CAACCTGGCC
AAGACCATGC TTTACGCCAT CAACGGCGGT GTGGATGAGA AGCTTAAGAC ACAGATCGGC
CCTAAATTTG AGCCAATCAA AGATGAAGTG CTGGACTTTG ACGATGTGAT GGGCCGCCTG
GACACCATGA TGGAGTGGTT AGCCACCCAA TATGTGTCTG CACTGAACGC TATCCACTAC
ATGCACGACA AGTACTCTTA CGAAGCGGCC CTGATGGCGC TACATGACAG AGACGTACGT
CGCACCATGG CTTGTGGTAT CGCTGGTCTG TCTATTGCTG CCGACTCACT GTCTGCCATC
AAGTTTGCCA AGGTTAAGCC AATTCGTGAC GAAAACGGCA TCGCCGTCGA TTTCGACATC
GAAGGTGAAT ATCCTAAGTT TGGTAACAAC GATGCACGCG TCGATGACCT GGCTACCGAG
CTGGTTGAGC GCTTCATGGC TAAGATCCGT CACAAGAAGA TGTACCGTAA CGCGATCCCG
ACTCAGTCTA TCCTCACCAT CACCTCAAAC GTGGTTTATG GTAAGAAGAC AGGGACGACA
CCAGACGGTC GTCCAGCCGG CGCGCCATTT GCACCGGGCG CAAACCCAAT GCACGGCCGT
GACGAGAAAG GCGCTATCGC CTCACTGACT TCAGTTGCCA AGCTGCCATT TGCTCACGCA
CAGGACGGTA TCTCTTATAC CTTCTCTATC GTGCCAAATG CCCTGGGTAA AGATGACGAC
GGTCGCCGCG CTAACCTGGC TGCGCTGATG GATGGTTACT TCGCTCACAA TGAGACCCGC
GAAGGTGGTC AGCACCTGAA CGTGAACGTG ATGAACCGCG AAATGCTGGA GGATGCAGTG
GTTAACCCTG ACAAATATCC ACAGCTGACT ATCCGTGTTT CTGGTTACGC CGTGCGCTTC
AACGCACTGA CACCAGAGCA GCAACAGGAC GTCATTACAC GTACTTTCAC CAAAGGGATG
TAA
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| Protein sequence | MTEKTELFTK AWEGFTPGDW KSEVNVRDFI QKNYKPYEGD ESFLAGATEA TSALWDKVME
GIKQENRTHA PVDFDTDKVS TITSHAAGYI DQDLETIVGL QTDAPLKRAM LPNGGIRMVE
GSCAAYGREL DPNIKYVYSE LRKTHNQGVF DIYTPEIMRC RKSGVLTGLP DAYGRGRIIG
DYRRIALYGI DYLMQEKFAQ FSSLQAQFEA GEDLSATMQL REEIAEQHKA LGQMKQMAAS
YGCDISGPAT NAKEAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDIYIER DINNGVLTEQ
QAQEMVDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIA GMGLDGRTLV TKSSFRFLHT
LYNMGPSPEP NITVLWSEKL PLNFKKYCAK VSIDTSSIQY ENDDLMRPDF DSDDYAIACC
VSPMVVGKHM QFFGARANLA KTMLYAINGG VDEKLKTQIG PKFEPIKDEV LDFDDVMGRL
DTMMEWLATQ YVSALNAIHY MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI
KFAKVKPIRD ENGIAVDFDI EGEYPKFGNN DARVDDLATE LVERFMAKIR HKKMYRNAIP
TQSILTITSN VVYGKKTGTT PDGRPAGAPF APGANPMHGR DEKGAIASLT SVAKLPFAHA
QDGISYTFSI VPNALGKDDD GRRANLAALM DGYFAHNETR EGGQHLNVNV MNREMLEDAV
VNPDKYPQLT IRVSGYAVRF NALTPEQQQD VITRTFTKGM
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