| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2386 |
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| Symbol | |
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| ID | 4921450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2794991 |
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| End bp | 2796520 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163976 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094511 |
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| Protein GI | 127513314 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1288] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.416992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0308106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATC AAGCGCCTTC CCCGGCGGTG AACCCGCAAA AGAAAATTCC TTTACCCGAT
ACTTTAGTGA TCATCTTCTT CGTGGCGCTA GCCGCCATGT TGTTGACCTA TCTGGTACCT
GTTGGCTCCT TCGAGACCCA GGAGATCCAT TATCTTGCCG ATGGCGTCGA AAAACAGCGT
AGTGTGGTCG ACCCGAACTC GTTTCGCTTT AGCCTGGATG AGGCCGGAGA GCATCTCAAG
CAACCGGTAG CCCTATTTGA GGGAGGGGGA GGCGTAGGTT TCTTTAACTT TGCCTTCGAA
GGCTTAACCT CGGGTTCTAA ATGGGGCACC GCCATAGGGG TGATCATGTT TATGCTGGTG
ATAGGCGGCG CCTTCGGCAT AGTGATGGAG ACTGGCACCA TAGATAACGG CATCATAAGG
CTTATTGATA AGACCCAGGG TAACGAGCGC CTCTTCATTC CCGTGCTCTT TATCCTGTTC
TCCCTTGGCG GCGCCGTGTT TGGCATGGGG GAGGAGGCGA TCGCCTTTGC CATCATCATC
TGCCCTTTGA TGATACGTTT AGGGTTCGAC GGCATCACCA CAGTGATGGT GACCTATGTG
GCGACTCAGG TGGGCTTTGC CAGCTCTTGG ATGAATCCCT TCAGCGTGGC GATTGCCCAG
GGCATCGCTG GGATTCCAGT GCTTTCCGGC GCTGGGGTGA GGGGCGTCAT GTGGGCAGGC
TTCACCCTGA TGGGGGTGAT CTTCACCATG CGCTACGGCG CCAAGATCCA GGCCAACCCC
CAAAGCTCAC TCTGTTATGA GTCGGACAGA TATTTTCGCG AGCATCATGG AGCGAACGAG
TTACAGAGCC GGTTTAACCT TGGCGATAGT CTGGTGCTGC TCACCATCTT GCTAACGGTT
ATCTGGGTGA TTTGGGGCGT TGTCGCTAAC GCCTGGTTTA TTCCTGAAAT TGCTAGTCAG
TTCTTTGCCA TGGGGATTGT GGTGGGGATG ATTGCGGTGA TCTTCAGGCT CAATGGTATG
ACGCTGAATC GTATGGCGAC CAGCTTCAAG CAAGGTGCTG GCACCATGCT TGAGCCAGCT
CTGCTGGTAG GCTGCGCCTC GGGGATCTTG CTGCTTCTCG GTGGCGGTAA GCCTGATGAA
CCTAGCGTAC TCAACACTTT ACTCAACAGC GCAGGCAGCT TGATTGGCCA ATTACCTGCG
GTCGCCTCGG CCTGGTTTAT GTTGCTGTTC CAGTCGGTGT TTAACTTCTT TGTGACCTCG
GGATCGGGCC AGGCCGCCTT GACCATGCCC TTGATGGCGC CCCTTGCCGA TATCGTCGGC
GTGTCGCGTC AGGTGGCCGT GTTGGCCTTT CAGTTGGGGG ATGGCTTCAC CAATGTGCTG
GTGCCGACGT CGGCGTCGTT GATGGCCACA TTAGGGGTAT GCCGTGTCGA TTGGGGTATT
TGGGTCAAGT TTATCTGGCG TTTCATGCTA GCGCTGTTTT TGGTCTCTAG CCTAGTGGTA
GTCGCCGCTC ATTATCTCGG CTTTGTCTAA
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| Protein sequence | MANQAPSPAV NPQKKIPLPD TLVIIFFVAL AAMLLTYLVP VGSFETQEIH YLADGVEKQR
SVVDPNSFRF SLDEAGEHLK QPVALFEGGG GVGFFNFAFE GLTSGSKWGT AIGVIMFMLV
IGGAFGIVME TGTIDNGIIR LIDKTQGNER LFIPVLFILF SLGGAVFGMG EEAIAFAIII
CPLMIRLGFD GITTVMVTYV ATQVGFASSW MNPFSVAIAQ GIAGIPVLSG AGVRGVMWAG
FTLMGVIFTM RYGAKIQANP QSSLCYESDR YFREHHGANE LQSRFNLGDS LVLLTILLTV
IWVIWGVVAN AWFIPEIASQ FFAMGIVVGM IAVIFRLNGM TLNRMATSFK QGAGTMLEPA
LLVGCASGIL LLLGGGKPDE PSVLNTLLNS AGSLIGQLPA VASAWFMLLF QSVFNFFVTS
GSGQAALTMP LMAPLADIVG VSRQVAVLAF QLGDGFTNVL VPTSASLMAT LGVCRVDWGI
WVKFIWRFML ALFLVSSLVV VAAHYLGFV
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