| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2382 |
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| Symbol | |
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| ID | 4921446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2788241 |
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| End bp | 2789209 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163972 |
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| Product | cysteine synthase A |
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| Protein accession | YP_001094507 |
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| Protein GI | 127513310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000192636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAA TTTTCGAAGA CAATTCATAT ACCATAGGTA ATACACCTCT TGTTCGCCTA
AATCGCGTCA GCAAGGGAAA TGTGCTCGCC AAGGTTGAGG CCCGTAACCC TAGCTTTAGT
GTAAAGTGTC GTATTGGCGC GAATATGATT TGGGACGCCG AAAAGAAGGG CTTGCTCACT
AAAGACAAAG AATTGATTGA GCCGACCTCA GGCAACACAG GTATTGCACT GGCCTATGTC
GCCGCGGCCC GTGGTTATAA GCTAACCCTG ACCATGCCAA ACACCATGAG CCTCGAGCGT
CGCAAACTGC TTAAAGCCTT GGGTGCCAAT CTTGTGCTGA CCGAAGGTGC CAAGGGTATG
AAGGGCGCCA TCGACAAGGC TGAAGAGCTG CGTCAATCTG CGCCAGAAAA ATATCTGATC
TTGGGCCAAT TCGATAATCC AGCAAACCCA GAGATCCATG AGAAGACCAC AGGTCCAGAG
ATCTGGAACG ACACAGACGG TGAAGTCGAT GTGGTTGTGG CGGGCGTGGG TACCGGCGGC
ACCATTACCG GTGTGAGTCG TTATATCAAG CAAACCCAAG GCAAGGCTAT CACCTCGGTT
GCAGTTGAGC CTGCAGACTC TCCTGTCATT GGCCAGACCA TGGCCGGTCA ACCTGTGCAG
CCTGGTCCAC ATAAGATCCA AGGTATCGGC GCAGGTTTCA TCCCAGGCAA CCTAGACCTT
GACGTGATCG ATCGCGTAGA AGCCGTGACC AACGAAGAAG CGATCGAGAT GGCCCAGCGC
CTGATGAAAG AGGAAGGTAT CCTGGTAGGT ATCTCTTCGG GTGCAGCGGT TGTTGCGGCA
AACCGTATCG CCGACTTGCC AGAGTTTGAA GGCAAGAACA TAGTGGTGAT CCTGCCATCT
GCGGCCGAAC GTTACCTCTC TTCTGTCCTG TTCCAAGGCC AATTTGGCGA CGCGGAAAAC
GTTCAGTAA
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| Protein sequence | MSKIFEDNSY TIGNTPLVRL NRVSKGNVLA KVEARNPSFS VKCRIGANMI WDAEKKGLLT
KDKELIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTEGAKGM
KGAIDKAEEL RQSAPEKYLI LGQFDNPANP EIHEKTTGPE IWNDTDGEVD VVVAGVGTGG
TITGVSRYIK QTQGKAITSV AVEPADSPVI GQTMAGQPVQ PGPHKIQGIG AGFIPGNLDL
DVIDRVEAVT NEEAIEMAQR LMKEEGILVG ISSGAAVVAA NRIADLPEFE GKNIVVILPS
AAERYLSSVL FQGQFGDAEN VQ
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