| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2374 |
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| Symbol | |
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| ID | 4921901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2775885 |
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| End bp | 2776784 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163964 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001094499 |
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| Protein GI | 127513302 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.165792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000137233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATAACTT CTGTTGCCGT CGTCGGCTGC GGCTGGTTTG GTCTGCCTTT GGCCAAGGCC
CTGTTAAGCC AAGGATTAAA GGTCACGGGC TCCAAGCGCT CGCCACAGGA GGCCGAGGCC
TTATCAGCCG ATGGAATCAC TGGCTTTGCG CTGGATTTAG AAACGCTTGA GAGTGAAGAT
TTGTCCTCTC AGACCCGCGA AGCGATAACC CAAGGCCTCG CCTGTGATGC CATAGTGATC
AACATTCCCC CAGGACTTCG CCGTGGTGAT AACGGCTATC TGGACCGCCT CAAGCGCCTC
AAGGCGTTAA TGGGGACTCA CGAATATCAG CGCATCATCT TTATCAGCAC GTCTGGTGTC
TATCCTGCCG GTGGCGACAG CTCTGGCAGT GGTTGCGTCG AGAGCGATGC TAAGGTCCAC
AGCCCGGCGA GCGAGACCTT ACTGGCCGCC GAGGCGCTCT TCTCAGGTGC TAACTCTGCC
GATGGCGTGT CCAACAATCA CTCTGATGGT AGCGAGTCTA ACAATAGCTG CGTCGTCGTG
CGTTTCGCCG GTCTCATTGG TCCCAAAAGG CATCCAGGAC GATTCCTGGC GGGAAGAGAA
GATGTGCCAG GCGGTAACCT AGCGGTGAAT ATGGTGCATC TCGATGATTG CATTGGTGCC
GTGACCTTGC TGCTGAAAGC CGAGGGGGCT TTATCGCCAG CCTATAATCT CTGCGCGCCG
CTGCATCCCA CCAAAGCTGA ATTTTATCAA AAAGCGGCGA CTCAGCAGGG GCTCACGCCG
CCCAGCTTTA TCGAGGGAGA CTTAGCTGAA GATAAGCGCG TCGATGGAGG CCTTATCACC
CGGGAGTTAA ACTATCAGTA TAAGTTTACC GATCCCCTAG CCATGTTGAC CCATTGCTAG
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| Protein sequence | MITSVAVVGC GWFGLPLAKA LLSQGLKVTG SKRSPQEAEA LSADGITGFA LDLETLESED
LSSQTREAIT QGLACDAIVI NIPPGLRRGD NGYLDRLKRL KALMGTHEYQ RIIFISTSGV
YPAGGDSSGS GCVESDAKVH SPASETLLAA EALFSGANSA DGVSNNHSDG SESNNSCVVV
RFAGLIGPKR HPGRFLAGRE DVPGGNLAVN MVHLDDCIGA VTLLLKAEGA LSPAYNLCAP
LHPTKAEFYQ KAATQQGLTP PSFIEGDLAE DKRVDGGLIT RELNYQYKFT DPLAMLTHC
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