| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2360 |
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| Symbol | |
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| ID | 4921732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2760413 |
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| End bp | 2761753 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163950 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001094485 |
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| Protein GI | 127513288 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0223413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.51106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG CTAATCACAT GACAAAACAT GAGTTAACTG GCCAGGACAA AGGCTCGCAG
ACCTGCGCAG CCTCTACCCA AAACGCGGAT GTCACAGTCA TAGGCGCTGG CGTTGTAGGC
CTTGCCAATG CCATCGCCTT GCAACAGGCG GGCTTTAGCG TGCGCGTCAT CGACAAGCAA
GGGGTAGCTG CGGGCGCCTC CTTTGGTAAC GCGGGCCACT TCGCCACCGA GCAGATGTTT
CCCCTGGCCG ACCCGGCCAT GTTATTCAAA CTGCCTGGCA TGTTGCTCGA CCCATTAGGG
CCGTTTCGCA TTCAGCCGCG CTATTTTCTC AAGGCCTTGC CTTGGTTCAT GCGCTTCTTA
GTCAATATGT TGCCCGCAAG ACGCGCCCAT AACTCGGCGG CGATCAAGGC GTTAAATCAA
AAGAGTATCC AAGCCTGGCA GCAGTTGGTG AGCGAGTGTG GCTGCTCCGA GTTACTCAAA
CTCGAGGGCA GTCTCTTGGT GTTTGAACAG ACGCCTTTTA TCGAGGTCGA GCGGGTATAC
AAGAGTTACC GTGATGCTGG CGTGGCGGTG AAGCTACTCA GCGGTGAGGA GGTGAGGACG
CTAGAGCCGG ATCTCAGCCC CAATATCAAC CACGGACTGT GGTTTACCCA GGTCGGCCAT
ACGCCGGACC CGGCCGAGCT GTGTCATCGC TTGGCAACGC AGTTTGAGAA ACTGGGGGGC
GAGCTGGTGA TCGCTGAGGT AATTCAGTTG GCTGCTGAAT GTAAGGGAGA TAATAAAGAG
AAAGGTGTTA ATGTCAGTGT CGCTAGCGGA GTAACTTACC AAAGCGACAA GTTATTGCTT
AGCGCCGGCG CCTGGTCTAA GCCTTTGGCG CAGCAGCTTG GCTTTAAGGT GCCGCTGGAA
ACCGAGCGTG GCTATCATCT GATGATGCCA CAGCAAAGTC GTCTGCAGCG GCCGGTGGCT
TCATTTGAGC GTAAGTTCAT CATCACCCCC ATGAACCGGG GGACTTGTCT GGCCGGCACG
GTTGAATTTG GCGGTCTTAA GGCGCCGCTG ATCGAGGCCA GGGCCGACTG TCTGCTGCCC
CATGCCAAGG CGCTGCTGCC AGATGTGTTG GCCAGTGCTA AAACCTCCCA GGGAGAGCGC
TGGATGGGCT TTAGACCGTC GCTGCCCGAT TCCCTGCCTG TGCTGGGCGC CTCACCTAAG
AGCGATAAGA TCTTCTTTGC CTTTGGTCAT CAACATCTGG GACTCTCCTG GGCCGCCTTT
AGCGCACAGC TCATGGCGGA AACCATTAAG GGGGAGGAGG TTACGGTGGA TATGACACCC
TACCGTATCG ACCGATTCTA A
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| Protein sequence | MIEANHMTKH ELTGQDKGSQ TCAASTQNAD VTVIGAGVVG LANAIALQQA GFSVRVIDKQ
GVAAGASFGN AGHFATEQMF PLADPAMLFK LPGMLLDPLG PFRIQPRYFL KALPWFMRFL
VNMLPARRAH NSAAIKALNQ KSIQAWQQLV SECGCSELLK LEGSLLVFEQ TPFIEVERVY
KSYRDAGVAV KLLSGEEVRT LEPDLSPNIN HGLWFTQVGH TPDPAELCHR LATQFEKLGG
ELVIAEVIQL AAECKGDNKE KGVNVSVASG VTYQSDKLLL SAGAWSKPLA QQLGFKVPLE
TERGYHLMMP QQSRLQRPVA SFERKFIITP MNRGTCLAGT VEFGGLKAPL IEARADCLLP
HAKALLPDVL ASAKTSQGER WMGFRPSLPD SLPVLGASPK SDKIFFAFGH QHLGLSWAAF
SAQLMAETIK GEEVTVDMTP YRIDRF
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