| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2349 |
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| Symbol | |
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| ID | 4922076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2743162 |
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| End bp | 2744511 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163934 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001094474 |
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| Protein GI | 127513277 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000892956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAA GGTTTAAACC CAAACAGCGT CTGCTCACGC GGATGTTTCT CACCTCGCTC
TCCATCATCG CCTTGGTGGG CTTCGGTCTC GCCTGGCTGG TCAACCTGTT GTACGCCCAG
AATAGCTACA ACGAGGAGAC CGCCGAGCTT ATCGCCGAGA TCCCCAAGGT GGCCGCCGAG
CTGAGGGAGC ACGACCTGAT CCCCGAGACC TCAGAATGGC TCGACGAGAA CAACACCCCG
GAAAAATATA TCATCGCCAG CTGCAACGAG GAGTTTAAGC AGGTATGGAC CTCCTCTCTG
GCCGTAGATC GTGGTCTGTT CGACACCTGT GAGCGCTTCA ACGAGATACG CTTCGACTCG
CCACCCTACT ACCTCAACCT TGCCGACAGT AAAAACTACT TCGTCTATCT CTTGTCGGTG
GAGATCGCCA AGCAAAAATA CAACCTGCTG GTGATGAAAG ATGCCCAGAA GCTGGAGCAG
GAGTTCGACA AGTTCAGTCG CCGCACCTAC TGGCGCCTGG GCATGATCCT GGCCCTGGCC
CTGGTGCTAT TGATCAGTGC CGGCTACTGG GGAATGCGCC CCTTGGTGCG TATGCGTAAC
GAGCTGCACC AGGTCAGCAG TGGCAAGGCC AAGGCGCTCT CCGAGGATTA CCCTGTCGAG
CTCGAAGGGG TCACCCAGGC GCTCAACCAA CTGCTGGTGC AATCCAGCGC CCAGCAGGAG
CGTTACCAGA ACGCGATGAA CGATCTCGCC CACAGCCTAA AGACGCGTCT GGCGGCGGTG
CACGCCATCA CGGACGATCA GACCCTGAGC AAGTCGGGGG CCAGCGAGAA GATCATGGAA
CAGGTGAGTC AGATGGATCA GTTGGTCAAG TATCAGCTCA AGCGCGCCAT GCTCGGCCGT
AAGGGCCTGA AACAGGAGCA GACCCTGGTT GCACCGCTGA TCGACCAGCT GTCGCAGATG
CTGTTTAAGG TCTACCGTGA CAAGCAGATC CAATTTAGCG CCGATATCCC GGATGATCAG
GTATTCCCCG GCGACAAAGG CGATCTGATG GAGCTGTGTG GCAACCTGAT GGAGAACGCC
TTCAAGCTCT GTATCAGCAA GGTAGCGGTC ACCGCCCGTT ACGGCGATAA CAGCGAGTTT
ATCTTGATCG TGGAAGATGA CGGCCCGGGG GTCCCCGAGG CCATTCGTCA ACGGATCATT
GAGCGCGGTG TGCGCGCCGA CACTCAAAAG GCTGGCCAAG GCATAGGGCT TGCCGTCTGT
AACGAAATCG TCTCCAGCTA CAACGGCAGC CTCAGCATAG ATACCTCATC CCTTGAGGGA
GCGAGGTTCA CCATCAAGAT CCCGCTTTAA
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| Protein sequence | MQIRFKPKQR LLTRMFLTSL SIIALVGFGL AWLVNLLYAQ NSYNEETAEL IAEIPKVAAE
LREHDLIPET SEWLDENNTP EKYIIASCNE EFKQVWTSSL AVDRGLFDTC ERFNEIRFDS
PPYYLNLADS KNYFVYLLSV EIAKQKYNLL VMKDAQKLEQ EFDKFSRRTY WRLGMILALA
LVLLISAGYW GMRPLVRMRN ELHQVSSGKA KALSEDYPVE LEGVTQALNQ LLVQSSAQQE
RYQNAMNDLA HSLKTRLAAV HAITDDQTLS KSGASEKIME QVSQMDQLVK YQLKRAMLGR
KGLKQEQTLV APLIDQLSQM LFKVYRDKQI QFSADIPDDQ VFPGDKGDLM ELCGNLMENA
FKLCISKVAV TARYGDNSEF ILIVEDDGPG VPEAIRQRII ERGVRADTQK AGQGIGLAVC
NEIVSSYNGS LSIDTSSLEG ARFTIKIPL
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