| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2347 |
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| Symbol | |
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| ID | 4922074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2741403 |
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| End bp | 2742257 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163932 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001094472 |
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| Protein GI | 127513275 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000191304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCG CTAAAATTCT ACCCTTAATC TTTACCTGTT TGTTTGTGCC GGCGACATTA
GCCGAAACCT TTACCTTTAC CGCCATCCCT GATGAAAACG AGAGTCAGCT AAAGACGCGT
TTCAACAAGG TAGCAAAGTA CCTGGAGACT GAGCTGGGCG TTAAGGTGAA CTATGTCCCG
GTCAAATCTT ACTCGGCAGC CGTTACCGCG TTTCGTAACA ATCAGGTGCA GCTGGCCTGG
TTTGGTGGCC TCTCTGGCGT GCAGGCGAGA CGTCTGGTGC CTGGCTCACA AGCGATTGCT
CAGGGTTATG AAGATCAATA CTTTAAGAGC TTCTTCATCG CCAATGCCTC GACTCCGCTC
GAGCAGTCGA CCAACTTCCC TAACCTGAAC GGTTATACCT TTACCTTCGG TTCGAAAGGA
TCGACCTCTG GCCGCCTAAT GCCGCAATTT TACATCGAGC GCAACATGGG CAAGCAGGTG
AAAGATATCT TTACCCGTAT CGGTTTCTCT GGCGACCATA GCCGCACCAT CGCCCAAGTC
GAGGCCGGTG CTTATCAGGT GGGCGCGGTA AACTACAAGG TATGGGAAAC GGCGGTGGCC
AATGGCACTG TGGATACCAG CAAGGTGAAG GTGATCTGGG AAACCCCAGC CTATCCAGAC
TATCAGTGGA CGGTACGTGC CGACGCCGAT CAACGTTTCG GTGCAGGCTT TACTGAGAAG
CTGACCAAGG CGCTACTGGA GATGAAAGAT CCGGATCTGC TAGCCAGCTT CCCACGTCAG
TCGTTTGTTG AGGCAGACAA CGCAGATTAC GAGCCTATCG AATCTGTGGC CACGGCGATC
GGCCTGCTAG ATTAA
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| Protein sequence | MSFAKILPLI FTCLFVPATL AETFTFTAIP DENESQLKTR FNKVAKYLET ELGVKVNYVP
VKSYSAAVTA FRNNQVQLAW FGGLSGVQAR RLVPGSQAIA QGYEDQYFKS FFIANASTPL
EQSTNFPNLN GYTFTFGSKG STSGRLMPQF YIERNMGKQV KDIFTRIGFS GDHSRTIAQV
EAGAYQVGAV NYKVWETAVA NGTVDTSKVK VIWETPAYPD YQWTVRADAD QRFGAGFTEK
LTKALLEMKD PDLLASFPRQ SFVEADNADY EPIESVATAI GLLD
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