| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2332 |
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| Symbol | |
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| ID | 4922112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2725893 |
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| End bp | 2726804 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163917 |
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| Product | siroheme synthase |
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| Protein accession | YP_001094457 |
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| Protein GI | 127513260 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.477134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATATT TTCCCATTTT CGCCCAGGCC GATGGGCTGA AGATCCTGAT GATAGGCGCA
GGCATTGTCG CCAGCCGCAA ACTTGAGTTG CTGAGCCGCA CCCAGGCCCA TATTCGGGTG
ATCGCTCCAG ATGTCTGCGA CGCCGTGATG GCCATGGCAA ACCAGGGGCA GATCGCCCTG
GAGCAGAGAT TCGCCGAACT CGACGACCTC GAAGGGATAG ATCTGCTCTA TATGGCCACC
AGTGACGAGC CTCTCAATCG TCAGTTTGCC CTGCAGGCCA AGGCGCTGGG GCTCTGGGTC
AATGTGGTCG ATGCCCCCAA GCTCTGTAAC TTCATCACCC CCGCCATCGT CGACAGGGGC
CGCTTACAGG TCGCTATCAG CACCAGTGGC GCCGCCCCCG TGTTTGCCCG CGAGCTTAGG
GCTCGTTTGG AGACCTGGCT GCCATCATCC TTGAGTGAAC TGTTCGATTT CATCGCCGAT
AAACGCACCG AGGTGCAGCA TCGGCTGCCG GCGTTTGAGC AGCGTAAGCT GTTTTGGGAG
CAGTTCTTCC GCCTCAATGG CGACAGATTC GATGAGCGCA CGGATAACTA TTTCGAGCAG
GCGTTCGGTA CGCTTTCGGG CAGTGGCGAG CTCTTGCTGC TCGAGGCCCA CACGCCAATC
GATCTGCTGC CCCTGGCCGC CGTGCCTATG ATGCAGCGTC TCGACTGGCT ATGTAGTGAC
TTAGCGCTGC CAGAGCGTCT GTCTGAGTTG GTGCGCCGCG ACGCCGGGCG TCAGCCCATG
TTACCGCTCA GTGAGTTATC AGCCAGGTTA GACAAGGGCG AGCGGGTGAT GGTCTACGCC
GAAACCGAGA CCATAGTTCA GCTGGTGGCC CATTTCCCCA TGGCGAAACA CCTGCGCCCG
GGCGCACTGT AA
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| Protein sequence | MQYFPIFAQA DGLKILMIGA GIVASRKLEL LSRTQAHIRV IAPDVCDAVM AMANQGQIAL
EQRFAELDDL EGIDLLYMAT SDEPLNRQFA LQAKALGLWV NVVDAPKLCN FITPAIVDRG
RLQVAISTSG AAPVFARELR ARLETWLPSS LSELFDFIAD KRTEVQHRLP AFEQRKLFWE
QFFRLNGDRF DERTDNYFEQ AFGTLSGSGE LLLLEAHTPI DLLPLAAVPM MQRLDWLCSD
LALPERLSEL VRRDAGRQPM LPLSELSARL DKGERVMVYA ETETIVQLVA HFPMAKHLRP
GAL
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