| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2330 |
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| Symbol | |
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| ID | 4922110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2723735 |
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| End bp | 2725171 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163915 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_001094455 |
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| Protein GI | 127513258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0840034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.981358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTGGT TTCTAATGTG TGTCGGCCTG CTACTCGGCG GATACTTCAT CTACGGTAAG
TTTGTTGAGA AGGTGTTCGG TATCAATACC GCTCGCCAAA CCCCCGCCTT TACCAAGACA
GACGGCGTCG ACTATGTGCC TATGTCAAAA GGTAAGGTTT ACCTGATCCA GCTGCTGAAC
ATTGCAGGTG TCGGCCCCAT CTTCGGCCCT ATCTTAGGTG CCCTCTATGG TCCTGCCGCC
ATGCTGTGGA TCGTGATCGG TTGTATCTTC GCCGGTGCGG TGCATGACTA CTTCTCTGGC
ATGCTGTCGG TACGCAACAA TGGCCAGTCT GTGCCAAACC TTGCCGGTAA GTACCTGGGC
AACAGCGCCA AGCACTTCAT GAACGTGTTT GCCATCATAC TCCTACTGCT CGTGGGCGTG
GTCTTCATCT CTGCGCCTGC TGGACTGCTC GGCAAGTTGA CCGGTTGGGA CGTTAGCCTG
TTCCTCGGCA TCATCTTCAC CTACTATCTG ATCGCCACCA TCGTGCCGGT CGACAAAATC
ATTGGTCGCC TCTATCCCTT CTTCGGCGCC CTGCTGCTGT TCATGTCTGT GGGTCTGACC
ATAGCACTGA TCGTCTCTAG CGAGCACACC CTGCTGCCAG GTTTCAGCGC CGGTGACTTC
CTGTCTAACC TGAACCCTAA CGACATGCCA CTCTGGCCTG CCCTGTTCAT CACCATCGCC
TGTGGCGCCG TATCTGGCTT CCACGCCACT CAGTCACCGC TGATGGCTCG CTGCGTCGAG
AATGAATCTA ACGGACGCTT CGTGTTCTAC GGTGCCATGA TAGGTGAAGG TATTATCGCC
CTGATCTGGT GTGCTATCGC CCTGTCATTC TTCGGCGGCG TAGAAGGCCT GAATGCCGGC
ATGGCGGGCA ACCCTGCAAA CGTTGTGTAT GAAGCTTCTA CTGGCCTGCT AGGCGCTGTG
GGTGGATTCA TGGCTATCCT AGGTGTGATT GTTCTCCCTA TCACCTCTGG CGATACCGCA
TTCCGCTCTG CACGTCTGAT CTTGTCTGAG TTCTTCAAGA TGCCACAGAC TGCATTGCCT
AAGCGTCTGG TGCTGGCTAT CCCACTGTTT GTGATTGGTG CGATTCTGAC TCAGGTCGAC
TTCGGGGTGA TCTGGCGTTA CTTCGGTGTG GCTAACCAGA CCACAGCCGT GATGATGCTT
TGGACCGCTT CTGCATACCT GCTACGTCAT AACAAGCTGC ACTGGATCTG TACCGTACCA
GCCATGTTCA TGACCACAGT GGTTATTAGC TTCCTGCTGA ACTCTGCCAC CTTAGGTGCA
GGCCTACCTA TGACGGTTTC TACCATTGCC GGTGTGGTAT CGACCTTGGT CATTACCGCA
CTCATCATAG TGAAGACTAA GGGCCGCGGC GAAGAAGAGT TACCCGAAGA AGCCTAA
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| Protein sequence | MMWFLMCVGL LLGGYFIYGK FVEKVFGINT ARQTPAFTKT DGVDYVPMSK GKVYLIQLLN
IAGVGPIFGP ILGALYGPAA MLWIVIGCIF AGAVHDYFSG MLSVRNNGQS VPNLAGKYLG
NSAKHFMNVF AIILLLLVGV VFISAPAGLL GKLTGWDVSL FLGIIFTYYL IATIVPVDKI
IGRLYPFFGA LLLFMSVGLT IALIVSSEHT LLPGFSAGDF LSNLNPNDMP LWPALFITIA
CGAVSGFHAT QSPLMARCVE NESNGRFVFY GAMIGEGIIA LIWCAIALSF FGGVEGLNAG
MAGNPANVVY EASTGLLGAV GGFMAILGVI VLPITSGDTA FRSARLILSE FFKMPQTALP
KRLVLAIPLF VIGAILTQVD FGVIWRYFGV ANQTTAVMML WTASAYLLRH NKLHWICTVP
AMFMTTVVIS FLLNSATLGA GLPMTVSTIA GVVSTLVITA LIIVKTKGRG EEELPEEA
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