Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2325 |
Symbol | |
ID | 4922105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2719779 |
End bp | 2720447 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163910 |
Product | hypothetical protein |
Protein accession | YP_001094450 |
Protein GI | 127513253 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.338387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.476496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTGC TTGTTGGGGG TGAGAAAGGC GGCGCGGGCA AGAGTTGCCT GGCCCAGAAT ATCGCCGTAC ATATCACTCA AAAATTCAAT GCCAACGTAT TGATGGTCGA CTGCGATCCC CAGCGCACCA CCTCTGACTG GATCCAGGCC CGGAACGAAG ATGCCAGCCT GCCTGCGATC AACTGTATCC AACTGTACGG TAAAATTCGT AATGATCTGC TTGGGTTAGA CCAAAGATTT GACTATGTGA TCGTCGACTG TGGCGGTCAG GATAACCTGG CAATGCGTGC GGCCATGTCG GTAGCCACCT ATGTGGTGCT GCCACTCAGG CCAAAGCGGC GCGATCTCAA GACCCTCCCC CATATGGAAG ATATGCTCAG TACCTGTAAG ATGGTCAACC CTAAGATGGT TGCTACCGTG GTGATGACAC AATGCCCAGC GCTGCCCAGC CAATATAAAC GCATATTGGA GGCCAAAGAG GTGGTTGAGT CATTTGGGCT GAGGGTGCTT GACGCGGTAA CCTTTAGCCG CAACGTCTAC GATGACAGTG AAGAACAGGG ATCGTCGGTC ATCGAAATCG AACCGGATGG AAAAGCCGCC GCCGAGATAC GTGCTATCGC CGATGAACTG TTTGCGATAC CACCAGAAAA TTCCTATGAG CTTAACTGA
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Protein sequence | MILLVGGEKG GAGKSCLAQN IAVHITQKFN ANVLMVDCDP QRTTSDWIQA RNEDASLPAI NCIQLYGKIR NDLLGLDQRF DYVIVDCGGQ DNLAMRAAMS VATYVVLPLR PKRRDLKTLP HMEDMLSTCK MVNPKMVATV VMTQCPALPS QYKRILEAKE VVESFGLRVL DAVTFSRNVY DDSEEQGSSV IEIEPDGKAA AEIRAIADEL FAIPPENSYE LN
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