Gene Shew_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2325 
Symbol 
ID4922105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2719779 
End bp2720447 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID640163910 
Producthypothetical protein 
Protein accessionYP_001094450 
Protein GI127513253 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.338387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.476496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC TTGTTGGGGG TGAGAAAGGC GGCGCGGGCA AGAGTTGCCT GGCCCAGAAT 
ATCGCCGTAC ATATCACTCA AAAATTCAAT GCCAACGTAT TGATGGTCGA CTGCGATCCC
CAGCGCACCA CCTCTGACTG GATCCAGGCC CGGAACGAAG ATGCCAGCCT GCCTGCGATC
AACTGTATCC AACTGTACGG TAAAATTCGT AATGATCTGC TTGGGTTAGA CCAAAGATTT
GACTATGTGA TCGTCGACTG TGGCGGTCAG GATAACCTGG CAATGCGTGC GGCCATGTCG
GTAGCCACCT ATGTGGTGCT GCCACTCAGG CCAAAGCGGC GCGATCTCAA GACCCTCCCC
CATATGGAAG ATATGCTCAG TACCTGTAAG ATGGTCAACC CTAAGATGGT TGCTACCGTG
GTGATGACAC AATGCCCAGC GCTGCCCAGC CAATATAAAC GCATATTGGA GGCCAAAGAG
GTGGTTGAGT CATTTGGGCT GAGGGTGCTT GACGCGGTAA CCTTTAGCCG CAACGTCTAC
GATGACAGTG AAGAACAGGG ATCGTCGGTC ATCGAAATCG AACCGGATGG AAAAGCCGCC
GCCGAGATAC GTGCTATCGC CGATGAACTG TTTGCGATAC CACCAGAAAA TTCCTATGAG
CTTAACTGA
 
Protein sequence
MILLVGGEKG GAGKSCLAQN IAVHITQKFN ANVLMVDCDP QRTTSDWIQA RNEDASLPAI 
NCIQLYGKIR NDLLGLDQRF DYVIVDCGGQ DNLAMRAAMS VATYVVLPLR PKRRDLKTLP
HMEDMLSTCK MVNPKMVATV VMTQCPALPS QYKRILEAKE VVESFGLRVL DAVTFSRNVY
DDSEEQGSSV IEIEPDGKAA AEIRAIADEL FAIPPENSYE LN