Gene Shew_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2323 
Symbol 
ID4922103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2718642 
End bp2719046 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content51% 
IMG OID640163908 
Productphosphate-starvation-inducible E 
Protein accessionYP_001094448 
Protein GI127513251 
COG category[S] Function unknown 
COG ID[COG3223] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0428039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.646848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAC TCTACACGCA ATATGGCTCT AAAAGCCTCA AAGCAATAGA ACATTTTGTT 
TTAATTATCA TCGCCATTGC CACCATAGTG GCCATAGGGC AAGAGATAGC GCACATCATC
AAGATGGGAG AGGTGGCGCT GGCTGATCTG CTGCTACTCT TCATCTATCT CGAGGTGCTG
GCCATGGTGG CCAACTACGC CGAGTCGGGT AAGTTGCCGG TGCGGATGCC GCTCTATATC
GCCATCGTCG CTTTGGCCCG TTATCTGATT CTCGATATGA AGGGAATGGA AGACTGGCGC
ATTCTGGCTA TCTCAGTATC TACCCTGGTG CTCGCCAGCA CGGTTATCGT GATCCGCTGG
GGTCAGCTAA AACTCCCCTA TCCTCGTAAA GAGGACGACC ACTAG
 
Protein sequence
MGKLYTQYGS KSLKAIEHFV LIIIAIATIV AIGQEIAHII KMGEVALADL LLLFIYLEVL 
AMVANYAESG KLPVRMPLYI AIVALARYLI LDMKGMEDWR ILAISVSTLV LASTVIVIRW
GQLKLPYPRK EDDH