Gene Shew_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2311 
Symbol 
ID4922161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2708637 
End bp2708828 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content55% 
IMG OID640163896 
Producthypothetical protein 
Protein accessionYP_001094436 
Protein GI127513239 
COG category[S] Function unknown 
COG ID[COG2975] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03412] FeS assembly protein IscX 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0157087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA TAGATTCTCT CGATGTGGCG CTCAGTCTGC TCGAGGCTCA TCCCGATGTG 
GATCCCGCCA AGATCCGCTT CACCGATCTG CGGGAATGGA TCCTGGCACT GGATGAGTTT
GACGACGATC CCAACCATTG CAACGAGCGG ATCCTAGAGG CGATTCAGGC CTGCTGGATC
AACGAGTACT GA
 
Protein sequence
MKWIDSLDVA LSLLEAHPDV DPAKIRFTDL REWILALDEF DDDPNHCNER ILEAIQACWI 
NEY