| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2310 |
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| Symbol | ndk |
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| ID | 4922160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2708004 |
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| End bp | 2708435 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163895 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | YP_001094435 |
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| Protein GI | 127513238 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00703116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATCG AACGTACTTT TTCTATCATC AAGCCTGATG CCGTTGCTAA AAACCACATC
GGTGCTATCT ACAACCGTTT TGAAACCGCT GGCCTGAAAA TCATCGCTTC TAAAATGGTT
CACCTAAGCA AAGAACAAGC TGAAGGCTTC TACGCCGAGC ACAGCGAGCG TCCTTTCTTC
GGCGCACTGG TTGAGTTCAT GACTTCTGGT CCTATCATGG TTCAAGTACT GGAAGGCGAA
AACGCTGTTC TGGCTAACCG TGAAATCATG GGTGCAACTA ACCCAGCTGA AGCGGCTCGT
GGCACTCTGC GTGCTGATTT CGCTGACAGC ATCGACGAGA ATGCCGTTCA CGGTTCTGAC
GCCGTTGCTT CTGCAGAGCG TGAAATCGCT TACTTCTTCA GCGCTGAAGA ACTTTGCCCA
CGTACTCGTT AA
|
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| Protein sequence | MAIERTFSII KPDAVAKNHI GAIYNRFETA GLKIIASKMV HLSKEQAEGF YAEHSERPFF
GALVEFMTSG PIMVQVLEGE NAVLANREIM GATNPAEAAR GTLRADFADS IDENAVHGSD
AVASAEREIA YFFSAEELCP RTR
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