Gene Shew_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2304 
Symbol 
ID4922297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2699766 
End bp2700431 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID640163889 
Productsporulation domain-containing protein 
Protein accessionYP_001094429 
Protein GI127513232 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTGG ATGAAGTAGA AGTCAAACAA GAGAAGGTAT CGAGCCAGTT TCAAAACCGT 
CTGGTGGGCA TCATAGTCTT GGTGGCCCTG GGGGTGATCT TTTTGCCCGA TATCTTAGAT
GGTAAGAAGC AGCATCAGGA AGAGCAGTTT GCCGAGATCC CACTGCGGCC CCAAGCCGAG
TCCCGCCTCG ATGAGCAGGA AAGTATTACG GCTATAGACC TGAGTGAGCA GCAGGCTCAG
TTCGACCAGC AGGTGAGCAG TCAAGCTGAT AGTGCCAACG TAGCTAAAAC CAGCGAGCCT
AAAACCAGTG AAGCTAAAAC CAGTGAAGCT AAAACCAGTG AAGCTAAAAC CAGTGAAGCT
AGGCAAACCC CTGCGAAAGT CACGCAAGCT AAGGCAACTG AATCTAAGGT TGAGGTCGCA
AGCTCAGCCT ATACTCTGCA ACTGGGTAGC TTTAAGAATG CCGATAATGT GAACGCCCTG
GTTAAACGTC TGCGAGGCGA GGGTTATCGT GCCTATACCG TGCCGCAAAA GCCGGTGGAT
GGTCAGCTGA CTAAGGTGTT TGTCGGCCCG GATATCTCCA AGAGCAAGCT ACAGAAGTTG
CAGACCAAGC TGGATAAGTT TACCGGCCTC AAGTCCGCGG TGGTCGACTA CAATCCGCTG
CTCTAA
 
Protein sequence
MQVDEVEVKQ EKVSSQFQNR LVGIIVLVAL GVIFLPDILD GKKQHQEEQF AEIPLRPQAE 
SRLDEQESIT AIDLSEQQAQ FDQQVSSQAD SANVAKTSEP KTSEAKTSEA KTSEAKTSEA
RQTPAKVTQA KATESKVEVA SSAYTLQLGS FKNADNVNAL VKRLRGEGYR AYTVPQKPVD
GQLTKVFVGP DISKSKLQKL QTKLDKFTGL KSAVVDYNPL L