Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2304 |
Symbol | |
ID | 4922297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2699766 |
End bp | 2700431 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163889 |
Product | sporulation domain-containing protein |
Protein accession | YP_001094429 |
Protein GI | 127513232 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTGG ATGAAGTAGA AGTCAAACAA GAGAAGGTAT CGAGCCAGTT TCAAAACCGT CTGGTGGGCA TCATAGTCTT GGTGGCCCTG GGGGTGATCT TTTTGCCCGA TATCTTAGAT GGTAAGAAGC AGCATCAGGA AGAGCAGTTT GCCGAGATCC CACTGCGGCC CCAAGCCGAG TCCCGCCTCG ATGAGCAGGA AAGTATTACG GCTATAGACC TGAGTGAGCA GCAGGCTCAG TTCGACCAGC AGGTGAGCAG TCAAGCTGAT AGTGCCAACG TAGCTAAAAC CAGCGAGCCT AAAACCAGTG AAGCTAAAAC CAGTGAAGCT AAAACCAGTG AAGCTAAAAC CAGTGAAGCT AGGCAAACCC CTGCGAAAGT CACGCAAGCT AAGGCAACTG AATCTAAGGT TGAGGTCGCA AGCTCAGCCT ATACTCTGCA ACTGGGTAGC TTTAAGAATG CCGATAATGT GAACGCCCTG GTTAAACGTC TGCGAGGCGA GGGTTATCGT GCCTATACCG TGCCGCAAAA GCCGGTGGAT GGTCAGCTGA CTAAGGTGTT TGTCGGCCCG GATATCTCCA AGAGCAAGCT ACAGAAGTTG CAGACCAAGC TGGATAAGTT TACCGGCCTC AAGTCCGCGG TGGTCGACTA CAATCCGCTG CTCTAA
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Protein sequence | MQVDEVEVKQ EKVSSQFQNR LVGIIVLVAL GVIFLPDILD GKKQHQEEQF AEIPLRPQAE SRLDEQESIT AIDLSEQQAQ FDQQVSSQAD SANVAKTSEP KTSEAKTSEA KTSEAKTSEA RQTPAKVTQA KATESKVEVA SSAYTLQLGS FKNADNVNAL VKRLRGEGYR AYTVPQKPVD GQLTKVFVGP DISKSKLQKL QTKLDKFTGL KSAVVDYNPL L
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